Protein–RNA interactions for Protein: O75503

CLN5, Ceroid-lipofuscinosis neuronal protein 5, humanhuman

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5O75503 AC019294.4-201ENST00000561777 2905 ntBASIC12.5□□□□□ -0.41
CLN5O75503 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLN5O75503 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLN5O75503 FAM109A-201ENST00000361483 3256 ntAPPRIS ALT2 TSL 3 BASIC12.5□□□□□ -0.41
CLN5O75503 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
CLN5O75503 SAMD4A-201ENST00000251091 6565 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
CLN5O75503 AC016582.3-202ENST00000443870 6580 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 GABPA-202ENST00000400075 4814 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 WDR17-205ENST00000508596 4294 ntAPPRIS ALT1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 NEDD4L-202ENST00000356462 3335 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 FNTB-201ENST00000246166 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 CMBL-201ENST00000296658 2335 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 NOX5-204ENST00000455873 2277 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 RAB3IL1-201ENST00000301773 2125 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 TBC1D3P2-203ENST00000581291 2088 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 AMT-221ENST00000538581 2038 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 DOK3-203ENST00000377112 1884 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 ATP5B-201ENST00000262030 1839 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 UEVLD-203ENST00000379387 1848 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 RPS9-207ENST00000441429 1600 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 KIAA0391-202ENST00000321130 1589 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 KLK10-202ENST00000358789 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 DYNC1LI2-203ENST00000443351 1502 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 FOXO1B-201ENST00000504678 1527 ntBASIC12.49□□□□□ -0.41
CLN5O75503 AC073957.3-201ENST00000609998 6758 ntBASIC12.49□□□□□ -0.41
CLN5O75503 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 AC004987.2-201ENST00000395959 1148 ntBASIC12.49□□□□□ -0.41
CLN5O75503 CRIP1-203ENST00000409393 677 ntAPPRIS P1 TSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 AL390729.1-201ENST00000456651 587 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 DDIT4-AS1-201ENST00000491934 847 ntTSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 RNA5SP410-201ENST00000516285 106 ntBASIC12.49□□□□□ -0.41
CLN5O75503 SLC25A1P1-201ENST00000528351 927 ntBASIC12.49□□□□□ -0.41
CLN5O75503 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 IGHV3OR16-6-201ENST00000568775 360 ntBASIC12.49□□□□□ -0.41
CLN5O75503 COX5A-206ENST00000568783 571 ntTSL 3 BASIC12.49□□□□□ -0.41
CLN5O75503 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 TMPO-202ENST00000266732 3615 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 STK26-202ENST00000394334 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 SWAP70-201ENST00000318950 4882 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 IGHG3-202ENST00000641136 2751 ntAPPRIS P1 BASIC12.49□□□□□ -0.41
CLN5O75503 JPH1-201ENST00000342232 4378 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 RAB43-202ENST00000393304 4230 ntAPPRIS P1 TSL 4 BASIC12.49□□□□□ -0.41
CLN5O75503 TMEM168-201ENST00000312814 7470 ntAPPRIS P1 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 AC105206.1-202ENST00000314927 2368 ntBASIC12.49□□□□□ -0.41
CLN5O75503 CD300LB-202ENST00000392621 2286 ntAPPRIS P2 TSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 LRRFIP1P1-201ENST00000498774 2246 ntBASIC12.49□□□□□ -0.41
CLN5O75503 SFMBT2-204ENST00000397167 8024 ntAPPRIS P1 TSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 FAM120A-202ENST00000375389 3585 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 KCNJ11-204ENST00000528731 2146 ntTSL 1 (best) BASIC12.49□□□□□ -0.41
CLN5O75503 AC018442.1-201ENST00000421439 2061 ntBASIC12.49□□□□□ -0.41
CLN5O75503 MAGED2-207ENST00000396224 2026 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 MEIOC-201ENST00000409122 4604 ntAPPRIS P2 TSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 ANKRD13B-201ENST00000394859 3214 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 TKT-201ENST00000296289 1931 ntTSL 5 BASIC12.49□□□□□ -0.41
CLN5O75503 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC12.49□□□□□ -0.41
CLN5O75503 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN5O75503 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 FGD2-201ENST00000274963 3046 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 MYLK3-202ENST00000536476 1795 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLN5O75503 TFR2-201ENST00000223051 2888 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 AL359881.3-201ENST00000602640 1721 ntBASIC12.48□□□□□ -0.41
CLN5O75503 GJB4-201ENST00000339480 2840 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
CLN5O75503 ZMIZ2-206ENST00000441627 5089 ntAPPRIS P4 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 ACTR2-202ENST00000377982 2685 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 TTK-201ENST00000230510 3477 ntAPPRIS ALT2 TSL 2 BASIC12.48□□□□□ -0.41
CLN5O75503 ANO10-203ENST00000396091 2419 ntTSL 2 BASIC12.48□□□□□ -0.41
CLN5O75503 EPHA5-204ENST00000511294 5176 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 FUT1-201ENST00000310160 4246 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN5O75503 RABL2B-204ENST00000395593 2341 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN5O75503 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN5O75503 SGCZ-201ENST00000382080 2234 ntAPPRIS P1 TSL 5 BASIC12.48□□□□□ -0.41
CLN5O75503 ABCC6-201ENST00000205557 5747 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 B4GALT6-201ENST00000237019 2128 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 ITGA9-AS1-201ENST00000366441 895 ntTSL 3 BASIC12.48□□□□□ -0.41
CLN5O75503 FAM220BP-201ENST00000377689 816 ntBASIC12.48□□□□□ -0.41
CLN5O75503 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC12.48□□□□□ -0.41
CLN5O75503 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
CLN5O75503 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC12.48□□□□□ -0.41
CLN5O75503 AL158071.2-201ENST00000423380 815 ntTSL 3 BASIC12.48□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 57.7 ms