Protein–RNA interactions for Protein: O43927

CXCL13, C-X-C motif chemokine 13, humanhuman

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL13O43927 AC026434.2-201ENST00000506094 1078 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC13.57□□□□□ -0.24
CXCL13O43927 RNA5SP486-201ENST00000515961 83 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCL13O43927 FLJ27354-203ENST00000526694 851 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL13O43927 AC078819.1-201ENST00000547454 765 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 AC012085.1-201ENST00000548270 765 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 VASH1-AS1-201ENST00000554058 871 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCL13O43927 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC13.57□□□□□ -0.24
CXCL13O43927 AP005482.1-201ENST00000563722 1273 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 RN7SL48P-201ENST00000579283 293 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 AL359881.2-201ENST00000602973 570 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 ECM1P1-201ENST00000604092 1279 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 ENPP7P14-201ENST00000621765 1040 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 AC138951.2-201ENST00000623455 1161 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 AL603764.1-201ENST00000636452 321 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 WASHC2A-202ENST00000314664 4519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 DBET-201ENST00000630918 3363 ntBASIC13.57□□□□□ -0.24
CXCL13O43927 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL13O43927 KAT8-201ENST00000219797 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL13O43927 PAK6-203ENST00000542403 2540 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 ADD2-208ENST00000430656 2332 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 ANKEF1-201ENST00000378380 5303 ntAPPRIS P1 TSL 2 BASIC13.57□□□□□ -0.24
CXCL13O43927 TUBB-206ENST00000330914 2632 ntTSL 2 BASIC13.57□□□□□ -0.24
CXCL13O43927 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC13.57□□□□□ -0.24
CXCL13O43927 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 PDP1-201ENST00000297598 4272 ntAPPRIS P3 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 PCDHGB8P-201ENST00000502926 1973 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 SLC35A3-221ENST00000640600 3341 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 CES4A-203ENST00000535696 1472 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 C1QB-201ENST00000314933 1044 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 CKLF-203ENST00000351137 508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 GBGT1-202ENST00000372038 847 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
CXCL13O43927 AC007405.2-202ENST00000418106 540 ntTSL 4 BASIC13.56□□□□□ -0.24
CXCL13O43927 CNN2P8-201ENST00000421872 913 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 AC245100.3-201ENST00000441281 285 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 LCN10-203ENST00000474369 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 AC119751.2-201ENST00000504529 210 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC13.56□□□□□ -0.24
CXCL13O43927 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 AP000812.2-201ENST00000538934 718 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 MIR4259-201ENST00000584466 101 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 LINC01887-202ENST00000584734 860 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 HTT-AS1_1.1-201ENST00000612914 230 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 RHOXF1P1-202ENST00000635473 501 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 COX11-210ENST00000639671 696 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC13.56□□□□□ -0.24
CXCL13O43927 ZBTB7C-213ENST00000588982 4949 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 CLDND1-215ENST00000507874 1380 ntTSL 3 BASIC13.56□□□□□ -0.24
CXCL13O43927 OR2I1P-209ENST00000641730 5365 ntBASIC13.56□□□□□ -0.24
CXCL13O43927 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC13.56□□□□□ -0.24
CXCL13O43927 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
CXCL13O43927 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
CXCL13O43927 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 MECR-202ENST00000373791 2416 ntTSL 2 BASIC13.55□□□□□ -0.24
CXCL13O43927 LINGO1-201ENST00000355300 3055 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 PSMD2-201ENST00000310118 3449 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
CXCL13O43927 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC13.55□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms