Protein–RNA interactions for Protein: O00148

DDX39A, ATP-dependent RNA helicase DDX39A, humanhuman

Known RBP Predictions only

Length 427 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39AO00148 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 TBXAS1-201ENST00000336425 2185 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 RASA4B-207ENST00000541662 2794 ntAPPRIS P2 TSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 ACTL8-201ENST00000375406 1861 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 EGLN3-201ENST00000250457 2709 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC17.03■□□□□ 0.32
DDX39AO00148 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
DDX39AO00148 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC17.03■□□□□ 0.32
DDX39AO00148 LILRP1-201ENST00000444199 1370 ntBASIC17.02■□□□□ 0.32
DDX39AO00148 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 MROH4P-201ENST00000431302 1578 ntBASIC17.02■□□□□ 0.32
DDX39AO00148 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 BET1L-201ENST00000325147 2916 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 SYT13-201ENST00000020926 5144 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
DDX39AO00148 AC092384.3-202ENST00000564646 2873 ntBASIC17.02■□□□□ 0.32
DDX39AO00148 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 INTS14-204ENST00000442903 1863 ntTSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 RREB1-204ENST00000379938 8778 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 LCN9-201ENST00000277526 531 ntAPPRIS P2 TSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 RBAK-RBAKDN-201ENST00000396904 766 ntAPPRIS P2 TSL 4 BASIC17.02■□□□□ 0.32
DDX39AO00148 BRWD1P1-201ENST00000401091 371 ntBASIC17.02■□□□□ 0.32
DDX39AO00148 RBAK-RBAKDN-202ENST00000407184 1001 ntAPPRIS ALT2 TSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 FAM8A4P-201ENST00000435433 1213 ntBASIC17.02■□□□□ 0.32
DDX39AO00148 FAM162A-202ENST00000469967 1015 ntTSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC17.02■□□□□ 0.32
DDX39AO00148 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC17.02■□□□□ 0.32
DDX39AO00148 AP002360.2-202ENST00000572035 738 ntTSL 3 BASIC17.02■□□□□ 0.32
DDX39AO00148 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC17.02■□□□□ 0.32
DDX39AO00148 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 AC008750.3-201ENST00000601148 437 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 COPS9-205ENST00000607357 418 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 LCN9-204ENST00000619315 528 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 AC093326.2-201ENST00000640770 729 ntTSL 5 BASIC17.02■□□□□ 0.32
DDX39AO00148 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
DDX39AO00148 ACHE-202ENST00000302913 2956 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
DDX39AO00148 HYAL1-201ENST00000266031 2517 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 PACSIN2-204ENST00000403744 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 PLD3-204ENST00000409281 2115 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
DDX39AO00148 TMEM50A-201ENST00000374358 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
DDX39AO00148 RNASEH2B-202ENST00000422660 4830 ntTSL 5 BASIC17.02■□□□□ 0.31
DDX39AO00148 MAD1L1-202ENST00000399654 2762 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DDX39AO00148 CDK18-201ENST00000360066 3141 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 BACE2-203ENST00000347667 8764 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
DDX39AO00148 CLUHP2-201ENST00000426660 1303 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 MAGEA2-208ENST00000623438 2009 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 ANKRD44-203ENST00000409153 2724 ntTSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 FLAD1-201ENST00000292180 2160 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 NR3C1-203ENST00000394464 6795 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC17.01■□□□□ 0.31
DDX39AO00148 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 MIR1908-201ENST00000410394 80 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC17.01■□□□□ 0.31
DDX39AO00148 AL589986.1-201ENST00000429230 789 ntTSL 5 BASIC17.01■□□□□ 0.31
DDX39AO00148 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 AL355994.2-201ENST00000447882 704 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 AL391280.1-201ENST00000506969 1062 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 AF111167.2-202ENST00000558267 599 ntTSL 4 BASIC17.01■□□□□ 0.31
DDX39AO00148 RN7SL560P-201ENST00000577943 264 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 MIR4538-201ENST00000581377 78 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 TNNT1-212ENST00000588981 1163 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
DDX39AO00148 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC17.01■□□□□ 0.31
DDX39AO00148 MIR6799-201ENST00000620297 69 ntBASIC17.01■□□□□ 0.31
DDX39AO00148 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 56.6 ms