Protein–RNA interactions for Protein: A6NER0

TBC1D3F, TBC1 domain family member 3F, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TBC1D3FA6NER0 FKBP9-201ENST00000242209 3462 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 DENND1A-202ENST00000373620 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 AC136759.1-203ENST00000527477 2196 ntTSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 PIK3CD-206ENST00000536656 5483 ntTSL 5 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 PIK3CD-208ENST00000628140 5483 ntTSL 5 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 VWA2-203ENST00000603594 2600 ntTSL 2 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 CNKSR1-214ENST00000531191 2673 ntTSL 5 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 ZNF711-201ENST00000276123 2887 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC15.05■□□□□ 0
TBC1D3FA6NER0 YY1AP1-211ENST00000368340 2927 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
TBC1D3FA6NER0 PAUPAR-201ENST00000630360 2965 ntBASIC15.05■□□□□ 0
TBC1D3FA6NER0 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 ALG1L2-201ENST00000425059 969 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 FNTAP2-201ENST00000430308 634 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 CALR4P-201ENST00000431943 946 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 AC010745.3-201ENST00000439745 415 ntTSL 3 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 HIST2H2BB-201ENST00000449108 381 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 ATP6V0CP2-201ENST00000469409 207 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 AC126915.1-201ENST00000522847 1038 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 IGHV3OR16-16-201ENST00000563644 343 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 CEP170B-204ENST00000556508 6683 ntTSL 5 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 MARCH4-201ENST00000273067 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 AC007326.2-201ENST00000624224 7579 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 NMNAT3-203ENST00000413939 1711 ntTSL 2 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 CCDC40-202ENST00000374876 2010 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 DEPDC5-203ENST00000400242 2395 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 PDK2-201ENST00000007708 2384 ntTSL 2 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 AL513477.1-201ENST00000602865 2407 ntBASIC15.05■□□□□ -0
TBC1D3FA6NER0 IMPDH1-202ENST00000348127 2479 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 TRPV4-204ENST00000536838 2514 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 HDAC11-214ENST00000446613 2875 ntTSL 5 BASIC15.05■□□□□ -0
TBC1D3FA6NER0 MAPKAP1-202ENST00000350766 3256 ntTSL 1 (best) BASIC15.05■□□□□ -0
TBC1D3FA6NER0 ZNF84-202ENST00000392319 7020 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CAMSAP1-203ENST00000409386 5730 ntAPPRIS ALT2 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 RASA4-201ENST00000262940 5605 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 TYSND1-201ENST00000287078 3644 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 KCND3-202ENST00000315987 2716 ntAPPRIS P4 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 SUPT20H-201ENST00000350612 2739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 ACSM2B-207ENST00000565232 2322 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 SLC35E2B-203ENST00000611123 5948 ntAPPRIS P1 TSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 NAF1-201ENST00000274054 1907 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 LYAR-201ENST00000343470 1569 ntAPPRIS P2 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 TBX10-201ENST00000335385 1548 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AC018735.1-201ENST00000437208 1502 ntBASIC15.04■□□□□ -0
TBC1D3FA6NER0 P2RX5-208ENST00000552050 1536 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 HSD17B6-206ENST00000555159 1525 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AL161772.1-201ENST00000610494 4412 ntBASIC15.04■□□□□ -0
TBC1D3FA6NER0 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AL136309.1-201ENST00000403917 691 ntBASIC15.04■□□□□ -0
TBC1D3FA6NER0 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CHMP1AP1-201ENST00000445563 662 ntBASIC15.04■□□□□ -0
TBC1D3FA6NER0 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AC100850.1-201ENST00000506768 649 ntBASIC15.04■□□□□ -0
TBC1D3FA6NER0 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 LBX1-201ENST00000370193 2900 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 NEK7-202ENST00000367385 4149 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 CYP4F22-202ENST00000601005 2445 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 KIAA1468-201ENST00000256858 5579 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 STRN-202ENST00000379213 2254 ntTSL 5 BASIC15.04■□□□□ -0
TBC1D3FA6NER0 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.04■□□□□ -0
TBC1D3FA6NER0 INO80-201ENST00000361937 6439 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms