Protein–RNA interactions for Protein: A2PYH4

HFM1, Probable ATP-dependent DNA helicase HFM1, humanhuman

Predictions only

Length 1,435 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HFM1A2PYH4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 PLA1A-205ENST00000494440 1775 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 TNRC18P2-201ENST00000417666 2714 ntBASIC22.01■■□□□ 1.11
HFM1A2PYH4 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 AC106794.1-201ENST00000506935 792 ntBASIC22.01■■□□□ 1.11
HFM1A2PYH4 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 AC009779.1-201ENST00000551138 283 ntBASIC22.01■■□□□ 1.11
HFM1A2PYH4 SYT17-208ENST00000568433 812 ntTSL 3 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 BBS1-225ENST00000630659 1934 ntTSL 5 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 WASH3P-204ENST00000558784 1644 ntTSL 5 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC22.01■■□□□ 1.11
HFM1A2PYH4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
HFM1A2PYH4 RPARP-AS1-202ENST00000492465 1556 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 ZNF764-202ENST00000395091 2970 ntAPPRIS ALT1 TSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
HFM1A2PYH4 MRPS12-201ENST00000308018 1207 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC22■■□□□ 1.11
HFM1A2PYH4 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 SMARCE1-204ENST00000400122 1263 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 SHANK2-210ENST00000449116 939 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 IGHV4-4-201ENST00000455737 417 ntAPPRIS P1 BASIC22■■□□□ 1.11
HFM1A2PYH4 AP000696.1-201ENST00000457669 1133 ntTSL 3 BASIC22■■□□□ 1.11
HFM1A2PYH4 RPL18P13-201ENST00000478088 569 ntBASIC22■■□□□ 1.11
HFM1A2PYH4 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 SMARCE1-213ENST00000578044 1184 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 SMARCE1-216ENST00000580419 1228 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 AC090164.2-201ENST00000611487 516 ntBASIC22■■□□□ 1.11
HFM1A2PYH4 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC22■■□□□ 1.11
HFM1A2PYH4 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 NAXD-202ENST00000424185 2311 ntTSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 FAM83A-201ENST00000276699 1858 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 ARRB2-204ENST00000412477 1779 ntTSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 AC009093.10-201ENST00000641956 1442 ntBASIC22■■□□□ 1.11
HFM1A2PYH4 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 MGRN1-201ENST00000262370 3968 ntAPPRIS P3 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC22■■□□□ 1.11
HFM1A2PYH4 EVA1A-202ENST00000393913 1802 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC22■■□□□ 1.11
HFM1A2PYH4 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC22■■□□□ 1.11
HFM1A2PYH4 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC22■■□□□ 1.11
HFM1A2PYH4 AC023824.1-201ENST00000562945 2975 ntBASIC22■■□□□ 1.11
HFM1A2PYH4 CRHR2-202ENST00000348438 1600 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 PSME1-201ENST00000206451 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 DEF8-202ENST00000418391 852 ntTSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AKR7A2P1-201ENST00000460134 915 ntBASIC21.99■■□□□ 1.11
HFM1A2PYH4 ARTN-209ENST00000479128 471 ntTSL 3 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 FAM86B1-218ENST00000534520 808 ntTSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 ACTG1P17-201ENST00000558391 1119 ntBASIC21.99■■□□□ 1.11
HFM1A2PYH4 EID1-202ENST00000560490 584 ntTSL 3 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 FBXL12-204ENST00000586469 544 ntTSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AL132994.2-201ENST00000603120 687 ntBASIC21.99■■□□□ 1.11
HFM1A2PYH4 AC004923.1-202ENST00000642106 209 ntBASIC21.99■■□□□ 1.11
HFM1A2PYH4 ILF2-205ENST00000615950 1906 ntTSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 AL358216.1-201ENST00000451601 1657 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 EXOG-201ENST00000287675 2792 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 HIST1H2AG-201ENST00000359193 2250 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 POMK-201ENST00000331373 1865 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
HFM1A2PYH4 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 THY1-206ENST00000528522 2050 ntAPPRIS P1 TSL 2 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC21.99■■□□□ 1.11
HFM1A2PYH4 MTHFR-210ENST00000641407 2387 ntBASIC21.98■■□□□ 1.11
HFM1A2PYH4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 ANO1-201ENST00000316296 2118 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 REEP1-202ENST00000453231 940 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AC021723.1-201ENST00000486306 515 ntBASIC21.98■■□□□ 1.11
HFM1A2PYH4 AC008406.1-201ENST00000509530 541 ntTSL 3 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AP002387.1-201ENST00000529369 680 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC21.98■■□□□ 1.11
HFM1A2PYH4 NAT9-212ENST00000581136 1011 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 34.1 ms