Protein–RNA interactions for Protein: Q9Y2I6

NINL, Ninein-like protein, humanhuman

Predictions only

Length 1,382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NINLQ9Y2I6 SLC5A7-202ENST00000409059 2032 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 SLC1A7-204ENST00000611397 2499 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 TUFT1-201ENST00000353024 2107 ntTSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 NR3C1-209ENST00000503201 2594 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC20.5■□□□□ 0.87
NINLQ9Y2I6 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 SDHAF4-201ENST00000370474 1196 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 WFIKKN2-202ENST00000426127 2193 ntTSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 REEP1-202ENST00000453231 940 ntTSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 LY6G6C-202ENST00000495859 937 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 MARK2P5-201ENST00000507649 634 ntBASIC20.49■□□□□ 0.87
NINLQ9Y2I6 FAM153B-214ENST00000512862 1071 ntAPPRIS ALT2 TSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 MT1H-202ENST00000569155 697 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ZNF213-206ENST00000574902 3208 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 MIR3619-201ENST00000579667 83 ntBASIC20.49■□□□□ 0.87
NINLQ9Y2I6 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 NDUFV2P1-201ENST00000596415 907 ntBASIC20.49■□□□□ 0.87
NINLQ9Y2I6 IGHV1OR21-1-201ENST00000622028 353 ntAPPRIS P1 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 AC005064.1-201ENST00000422488 2725 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ALPI-201ENST00000295463 2550 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 RECQL4-210ENST00000621189 3896 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
NINLQ9Y2I6 TRAF3IP1-202ENST00000391993 4003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 ACE3P-201ENST00000423435 1973 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 TRPC6-203ENST00000360497 2631 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 KRTAP19-7-201ENST00000334849 440 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CTNNBIP1-202ENST00000377258 852 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CRYBA2-202ENST00000392096 708 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AL008707.1-201ENST00000422498 534 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC007406.3-201ENST00000537295 1063 ntTSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CSH2-206ENST00000560142 749 ntTSL 5 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC100827.2-201ENST00000563214 1194 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 NRN1L-202ENST00000576147 681 ntAPPRIS ALT2 TSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 NCR1-206ENST00000598576 996 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 DNAJC17-212ENST00000627802 428 ntTSL 4 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC068587.8-201ENST00000641239 219 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC138627.1-207ENST00000641560 1006 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 ACE-204ENST00000428043 5120 ntTSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 SLC27A6-201ENST00000262462 3219 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 RASAL1-207ENST00000548055 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 LYPLA1-214ENST00000618741 2526 ntTSL 5 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 ELAVL1-205ENST00000596459 1473 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 AC073347.1-201ENST00000421633 2643 ntBASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 FBXO5-202ENST00000367241 2221 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 STX1A-201ENST00000222812 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 STX1A-204ENST00000395156 2050 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 CLIC5-208ENST00000544153 2051 ntTSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
NINLQ9Y2I6 SDCCAG3P2-201ENST00000326105 1023 ntBASIC20.47■□□□□ 0.87
NINLQ9Y2I6 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PTPA-217ENST00000434095 870 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 AC005740.2-201ENST00000511085 419 ntBASIC20.47■□□□□ 0.87
NINLQ9Y2I6 AC104241.2-201ENST00000532748 789 ntTSL 3 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 CYP4B1-215ENST00000640628 969 ntTSL 5 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 Z98259.2-201ENST00000641583 609 ntBASIC20.47■□□□□ 0.87
NINLQ9Y2I6 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 PRAG1-202ENST00000622241 4639 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 MAPK14-201ENST00000229794 3779 ntAPPRIS P5 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 AC138035.3-201ENST00000622706 2791 ntBASIC20.47■□□□□ 0.87
NINLQ9Y2I6 SCML4-201ENST00000369020 1491 ntAPPRIS P1 TSL 5 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 KANK1-204ENST00000382293 5249 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 RRM2-202ENST00000360566 3673 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC20.47■□□□□ 0.87
NINLQ9Y2I6 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC20.47■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 52.3 ms