Protein–RNA interactions for Protein: Q9P218

COL20A1, Collagen alpha-1(XX) chain, humanhuman

Predictions only

Length 1,284 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1Q9P218 CAMK2B-206ENST00000353625 1624 ntAPPRIS ALT1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ASB3-202ENST00000394717 1734 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 HID1-202ENST00000425042 3271 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 AHCY-201ENST00000217426 2143 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ELMO3-202ENST00000393997 2531 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 CICP23-201ENST00000605013 2741 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 DEF8-202ENST00000418391 852 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 AC104073.2-201ENST00000453737 312 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 IGHJ2P-201ENST00000454480 60 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 GCOM2-201ENST00000509133 1104 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 SDHD-202ENST00000525291 790 ntTSL 3 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 AC005324.6-201ENST00000587972 613 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 AC132192.2-201ENST00000596206 1147 ntBASIC16.96■□□□□ 0.31
COL20A1Q9P218 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 AL445288.1-201ENST00000610846 654 ntTSL 4 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ACTA1-202ENST00000366684 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 TMEM258-207ENST00000543510 1692 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC16.96■□□□□ 0.31
COL20A1Q9P218 DGKZ-205ENST00000456247 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.31
COL20A1Q9P218 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL20A1Q9P218 MLKL-202ENST00000308807 2523 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COL20A1Q9P218 TMEM25-206ENST00000442938 2228 ntTSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 TMEM198B-203ENST00000482378 2230 ntTSL 1 (best) BASIC16.96■□□□□ 0.3
COL20A1Q9P218 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL20A1Q9P218 AC093525.2-201ENST00000564543 1944 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 AC004899.1-201ENST00000424687 1714 ntBASIC16.96■□□□□ 0.3
COL20A1Q9P218 ITGB1BP1-204ENST00000360635 4859 ntAPPRIS P1 TSL 5 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.3
COL20A1Q9P218 CXorf40B-202ENST00000370404 1316 ntAPPRIS P2 TSL 2 BASIC16.96■□□□□ 0.3
COL20A1Q9P218 SYN1-202ENST00000340666 3172 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 API5-203ENST00000455725 2257 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 F11R-206ENST00000621309 4770 ntTSL 5 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AC244394.1-201ENST00000435000 1665 ntBASIC16.95■□□□□ 0.3
COL20A1Q9P218 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 FIS1-201ENST00000223136 734 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 NRSN2-201ENST00000382285 1047 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 WDR81-206ENST00000446363 2968 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ZNF302-207ENST00000505365 2955 ntTSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.95■□□□□ 0.3
COL20A1Q9P218 ANO1-AS1-201ENST00000524987 646 ntTSL 3 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AL136309.4-201ENST00000527831 640 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ADIG-204ENST00000537425 770 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 DIO1-215ENST00000610607 796 ntTSL 5 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AL023803.2-201ENST00000620080 638 ntBASIC16.95■□□□□ 0.3
COL20A1Q9P218 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AL137026.1-201ENST00000624407 503 ntTSL 4 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 SMYD1-203ENST00000444564 1816 ntTSL 5 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 PCOLCE-201ENST00000223061 1702 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 SLC13A5-208ENST00000573648 1723 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 TICAM2-201ENST00000427199 3049 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ETNPPL-201ENST00000296486 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 AGAP7P-201ENST00000582299 2062 ntBASIC16.95■□□□□ 0.3
COL20A1Q9P218 AGAP14-201ENST00000624701 2060 ntBASIC16.95■□□□□ 0.3
COL20A1Q9P218 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ZNF385A-201ENST00000338010 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
COL20A1Q9P218 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC16.94■□□□□ 0.3
COL20A1Q9P218 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 KCNH3-201ENST00000257981 3867 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 TMEM115-201ENST00000266025 2197 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
COL20A1Q9P218 ZFAND5-205ENST00000376962 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms