Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 ZNF18-201ENST00000322748 2767 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 GSG1L-203ENST00000447459 4916 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 TIFA-201ENST00000361717 4157 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 MPI-203ENST00000535694 1523 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 MIR661-201ENST00000384842 89 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 GRAP-202ENST00000395635 834 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 GOLGA6L11P-201ENST00000417252 1298 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC007405.3-202ENST00000426475 660 ntTSL 3 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC243562.3-201ENST00000559866 1212 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC104794.3-201ENST00000566840 1248 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 RRP7BP-205ENST00000566851 833 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ZNF324B-203ENST00000594214 564 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 IFI27-206ENST00000612813 725 ntAPPRIS P2 TSL 3 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC004840.1-201ENST00000636359 365 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CDC25B-203ENST00000344256 3071 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CATSPER4-202ENST00000456354 1912 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CACNA1G-208ENST00000442258 7226 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 PLIN1-201ENST00000300055 2953 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC093525.8-201ENST00000624099 1342 ntBASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 PES1-204ENST00000402284 2144 ntTSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 LIMK2-204ENST00000406516 2657 ntTSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 ADPRHL1-201ENST00000356501 1877 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
NEUROD4Q9HD90 KCNMA1-262ENST00000639489 4302 ntAPPRIS ALT2 TSL 5 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 CISH-202ENST00000443053 2167 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 ARVCF-202ENST00000401994 2700 ntTSL 5 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 TRAF1-201ENST00000373887 6324 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 OAS1-202ENST00000445409 1684 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 CHN2-201ENST00000222792 3530 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 KCNMA1-202ENST00000286628 6233 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 OR8S1-201ENST00000310194 1080 ntBASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 RPUSD3-204ENST00000424438 1005 ntTSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 CRB3P1-201ENST00000449338 276 ntBASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 FAM86LP-201ENST00000478302 853 ntBASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AL391261.2-201ENST00000554907 773 ntTSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 ZNF557-201ENST00000252840 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 CXorf40A-209ENST00000441248 2411 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 USP35-204ENST00000530267 2419 ntTSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 AC007686.3-201ENST00000619017 3487 ntBASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 KLK8-211ENST00000600767 1324 ntAPPRIS P1 TSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 TDRD10-201ENST00000368480 1776 ntAPPRIS ALT2 TSL 2 BASIC14.37□□□□□ -0.11
NEUROD4Q9HD90 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 PTGES3L-AARSD1-202ENST00000409103 1670 ntTSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 NRXN1-222ENST00000625672 8113 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 DRD5P1-201ENST00000456605 1438 ntBASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 EIF4G3-204ENST00000374935 5567 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
NEUROD4Q9HD90 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms