Protein–RNA interactions for Protein: Q9HCU0

CD248, Endosialin, humanhuman

Predictions only

Length 757 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD248Q9HCU0 COG8-206ENST00000306875 4247 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 GORASP2-201ENST00000234160 3173 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 SLC34A2-203ENST00000504570 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 PHLDA2-201ENST00000314222 955 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 TEN1-201ENST00000397640 994 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 DSCR3-202ENST00000398998 988 ntTSL 5 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 HIST1H2BPS3-201ENST00000419683 341 ntBASIC16.05■□□□□ 0.16
CD248Q9HCU0 AC073133.1-201ENST00000426187 432 ntTSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 AL442647.2-201ENST00000429864 857 ntBASIC16.05■□□□□ 0.16
CD248Q9HCU0 HIST2H2BA-202ENST00000430394 752 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 LINC01067-201ENST00000432575 664 ntTSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 ELP6-209ENST00000446787 894 ntTSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 C12orf10-204ENST00000548632 988 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 USP31-203ENST00000567975 2142 ntTSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 AC010319.3-201ENST00000597028 470 ntBASIC16.05■□□□□ 0.16
CD248Q9HCU0 MALAT1-213ENST00000618227 593 ntTSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 PSMF1-201ENST00000246015 2042 ntAPPRIS ALT1 TSL 3 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 NACC1-201ENST00000292431 4445 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 SCARF1-201ENST00000263071 3443 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 CMKLR1-206ENST00000552995 1890 ntAPPRIS P3 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 PRKN-204ENST00000366896 2514 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 ABCB9-216ENST00000542678 6051 ntAPPRIS P2 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 NAGK-208ENST00000455662 1778 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 KRT20-201ENST00000167588 1737 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
CD248Q9HCU0 G6PD-203ENST00000393564 1661 ntAPPRIS ALT2 TSL 5 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC16.05■□□□□ 0.16
CD248Q9HCU0 AMT-232ENST00000636199 1546 ntTSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 MBD1-201ENST00000269468 3259 ntAPPRIS P3 TSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 PES1-201ENST00000335214 1988 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 ICAM3-201ENST00000160262 1934 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 WSB2-202ENST00000441406 1353 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 APBB1-218ENST00000608655 1920 ntTSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 MCC-202ENST00000408903 3476 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 KCNK7-201ENST00000340313 1298 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 AP000317.2-201ENST00000362077 641 ntTSL 3 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 TOMM22P5-201ENST00000416399 439 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 CROCCP4-201ENST00000457096 498 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 SELENOT-203ENST00000477889 944 ntTSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 AC009720.1-201ENST00000511867 586 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 AL390726.5-201ENST00000562942 871 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 BRI3BPP1-201ENST00000594224 787 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 MIR6775-201ENST00000617557 69 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 MIR6799-201ENST00000620297 69 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 C9orf78-201ENST00000372447 1795 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 CCDC181-206ENST00000491570 1652 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 LCOR-202ENST00000356016 4834 ntAPPRIS P3 TSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 ARPC4-TTLL3-201ENST00000397256 2466 ntAPPRIS P1 TSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 ELMSAN1-202ENST00000394071 7721 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CD248Q9HCU0 NADSYN1-216ENST00000530055 2416 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 ABCA1-203ENST00000423487 1540 ntTSL 2 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 FLJ16779-201ENST00000612722 7638 ntBASIC16.04■□□□□ 0.16
CD248Q9HCU0 BPTF-202ENST00000321892 11292 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
CD248Q9HCU0 PPP1R13L-202ENST00000418234 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 PLCB3-202ENST00000325234 3946 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ROR2-202ENST00000375715 2993 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 CDH20-202ENST00000536675 2855 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 MFSD11-211ENST00000588460 3612 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ZNF607-201ENST00000355202 4364 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 IDH3G-203ENST00000370093 1662 ntTSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 MTRF1L-202ENST00000367231 3539 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 DESI2-202ENST00000302550 4208 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 NPY-201ENST00000242152 585 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CD248Q9HCU0 KRT18P64-201ENST00000434946 1219 ntBASIC16.03■□□□□ 0.16
CD248Q9HCU0 NME4-207ENST00000450036 985 ntTSL 3 BASIC16.03■□□□□ 0.16
CD248Q9HCU0 HNRNPA1P13-201ENST00000510646 963 ntBASIC16.03■□□□□ 0.16
CD248Q9HCU0 AC104596.2-201ENST00000512793 793 ntBASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms