Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC012508.2-201ENST00000567613 1472 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PRELP-201ENST00000343110 5747 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 APOA1-201ENST00000236850 1227 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 APOA1-205ENST00000375329 927 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 WDR45-208ENST00000396681 1146 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 MPV17-208ENST00000405076 603 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 KRT17P7-201ENST00000451704 1104 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AP005018.1-201ENST00000525475 301 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 POLE2-203ENST00000553805 496 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 C14orf178-204ENST00000557011 474 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AL596325.1-201ENST00000563991 1082 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC105233.6-201ENST00000642093 218 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 R3HDM2-201ENST00000347140 4331 ntAPPRIS P2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 CREB3L3-201ENST00000078445 2618 ntAPPRIS P3 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 CDH23-202ENST00000299366 3954 ntTSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 ABCG2-201ENST00000237612 4479 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 RAPGEF3-205ENST00000449771 6061 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 WASH3P-207ENST00000560956 1394 ntBASIC13.32□□□□□ -0.28
CDH20Q9HBT6 TP73-204ENST00000378280 2062 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 FAN1-207ENST00000565466 2304 ntTSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 SYBU-206ENST00000424158 3007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC092053.3-201ENST00000641308 4975 ntBASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 IQCF3-205ENST00000456080 1685 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CHTF18-205ENST00000455171 3172 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CD209-207ENST00000593660 1497 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 STMN1-203ENST00000399728 1712 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 VLDLR-202ENST00000382099 3240 ntAPPRIS ALT1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 KCNC2-207ENST00000548513 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AGPAT1-202ENST00000375104 2017 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 HMOX2-204ENST00000414777 1752 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC009486.1-201ENST00000569860 813 ntBASIC13.31□□□□□ -0.28
CDH20Q9HBT6 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 LINC00116-201ENST00000414416 2051 ntAPPRIS P5 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CEP70-213ENST00000489254 1811 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 AC007787.1-201ENST00000588095 1583 ntBASIC13.31□□□□□ -0.28
CDH20Q9HBT6 MAD1L1-203ENST00000402746 2355 ntTSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 SLC6A13-201ENST00000343164 2185 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 IVL-201ENST00000368764 2153 ntAPPRIS P1 TSL 2 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 FKBP5-203ENST00000539068 3827 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CNDP1-201ENST00000358821 2215 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
CDH20Q9HBT6 CU639417.3-201ENST00000624240 1404 ntBASIC13.3□□□□□ -0.28
CDH20Q9HBT6 FMO5-201ENST00000254090 2632 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ZNF219-202ENST00000421093 2908 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 ZNF570-201ENST00000330173 5559 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
CDH20Q9HBT6 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms