Protein–RNA interactions for Protein: Q9C0C7

AMBRA1, Activating molecule in BECN1-regulated autophagy protein 1, humanhuman

Predictions only

Length 1,298 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AMBRA1Q9C0C7 AL359881.3-201ENST00000602640 1721 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 MAP2K1-201ENST00000307102 3410 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CCL25-201ENST00000253451 953 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 BAD-202ENST00000394531 631 ntTSL 3 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CXCL12-206ENST00000395795 404 ntTSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AC104457.1-201ENST00000401024 814 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 HLA-DRB6-201ENST00000411500 1235 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AL451067.1-201ENST00000453111 394 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 BAD-207ENST00000544785 525 ntTSL 3 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AC027088.1-201ENST00000557966 1117 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 TBCB-211ENST00000589996 724 ntTSL 3 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AL158211.3-201ENST00000607385 239 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AC093512.1-201ENST00000617969 520 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 MIR6069-201ENST00000620069 79 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AF228730.6-201ENST00000641497 218 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AL645728.2-202ENST00000641679 227 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AC084121.3-201ENST00000641716 218 ntBASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 KCNC2-202ENST00000350228 3344 ntAPPRIS ALT2 TSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SYAP1-201ENST00000380155 6129 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 AC087521.1-201ENST00000501541 2045 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 ASF1A-201ENST00000229595 2362 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SPRY2-201ENST00000377102 2708 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CPSF6-203ENST00000456847 1915 ntTSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 TUBA3E-201ENST00000312988 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 CBX3-202ENST00000396386 1857 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 JRK-210ENST00000614134 8932 ntAPPRIS P4 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 OPRL1-201ENST00000336866 3321 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PFDN4-201ENST00000371419 1462 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 PRAMEF25-202ENST00000619661 1840 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
AMBRA1Q9C0C7 RIMS1-216ENST00000521978 5079 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SEC63-201ENST00000369002 6411 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 USP19-203ENST00000398892 4622 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 KIRREL3-202ENST00000525704 2474 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 IMPDH1-204ENST00000419067 2431 ntTSL 3 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SLC4A7-210ENST00000440156 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 IL11RA-215ENST00000602473 1388 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SHMT2-202ENST00000414700 2006 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SLC26A1-201ENST00000361661 3660 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 FES-202ENST00000394300 2302 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 XRCC3-211ENST00000555055 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 HSD17B10-203ENST00000375304 916 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 LRCOL1-201ENST00000376608 778 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 NQO2-203ENST00000380441 1021 ntTSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 ASMT-201ENST00000381229 1087 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 RAB17-204ENST00000409822 1077 ntTSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PFN2-205ENST00000461868 613 ntTSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 RPL10P19-202ENST00000520582 722 ntTSL 3 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AP002748.3-201ENST00000527092 828 ntTSL 3 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AC025048.3-201ENST00000590609 569 ntBASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AC005702.4-201ENST00000618393 416 ntBASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CICP20-201ENST00000443330 2801 ntBASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CDKL3-206ENST00000521118 2160 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 MAGEA9-201ENST00000243314 1814 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 CDKN1A-208ENST00000615513 2102 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SCYL1-205ENST00000524944 2715 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 PDE4A-209ENST00000592685 2707 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 ZBTB45P1-201ENST00000452761 1456 ntBASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 KCNH6-202ENST00000456941 2928 ntTSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 ZHX1-201ENST00000297857 5200 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
AMBRA1Q9C0C7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms