Protein–RNA interactions for Protein: Q9BWH6

RPAP1, RNA polymerase II-associated protein 1, humanhuman

Predicted RBP Predictions only

Length 1,393 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPAP1Q9BWH6 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
RPAP1Q9BWH6 MAX-205ENST00000358664 1546 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 ZNF334-202ENST00000457685 3487 ntTSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 PIMREG-205ENST00000572447 1948 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 VWA7-201ENST00000375688 2881 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 NEU2-201ENST00000233840 1143 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 CSHL1-203ENST00000346606 659 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 CALR4P-201ENST00000431943 946 ntBASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AP000350.4-201ENST00000433835 788 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC114812.1-204ENST00000449669 728 ntBASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AL133523.1-201ENST00000554537 331 ntTSL 3 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC012322.1-201ENST00000561657 861 ntTSL 3 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AL022328.3-201ENST00000607943 679 ntBASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 AC007191.1-201ENST00000623179 2995 ntBASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 SFTA2-203ENST00000634371 815 ntTSL 5 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 SLC9A7P1-202ENST00000556476 2239 ntBASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 SLAIN1-216ENST00000488699 1461 ntTSL 2 BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
RPAP1Q9BWH6 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 GLMP-214ENST00000614643 1851 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 SEPT9-244ENST00000592420 2588 ntTSL 2 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 LINGO1-204ENST00000561030 2677 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 PIDD1-202ENST00000411829 2886 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 FBXO8-202ENST00000503293 1546 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 ARHGEF10-201ENST00000349830 5590 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 PNPLA5-202ENST00000381198 2000 ntTSL 2 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 LINC02551-202ENST00000533812 2203 ntTSL 5 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 TRPV4-201ENST00000261740 3233 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RPAP1Q9BWH6 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 AC026748.1-201ENST00000624349 3251 ntBASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 PIK3IP1-201ENST00000215912 2467 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 TREM2-203ENST00000373122 1012 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 GPR17-202ENST00000393018 1177 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 BTBD6P1-201ENST00000412176 1267 ntBASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 KC6-205ENST00000599934 556 ntTSL 4 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 ZNF84-215ENST00000543758 3501 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 SNX18-202ENST00000343017 3140 ntBASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 ATP6V1H-202ENST00000359530 2007 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 AL365199.1-201ENST00000421320 1714 ntTSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 INSIG1-201ENST00000340368 3010 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 C6orf106-203ENST00000374026 4232 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 TOM1L2-202ENST00000379504 2418 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 GRK6-203ENST00000393576 2792 ntTSL 5 BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 LYSMD4-204ENST00000409796 2672 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RPAP1Q9BWH6 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AL139094.1-201ENST00000405549 1188 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 MIR1202-201ENST00000408529 83 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 CNN2P10-201ENST00000443067 918 ntBASIC18.31■□□□□ 0.52
RPAP1Q9BWH6 AC004471.1-201ENST00000456035 582 ntTSL 4 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms