Protein–RNA interactions for Protein: Q9BTV4

TMEM43, Transmembrane protein 43, humanhuman

Predictions only

Length 400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM43Q9BTV4 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 KCTD3-201ENST00000259154 3931 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 PLXNC1-202ENST00000545312 1813 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 FAM8A1-201ENST00000259963 4677 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 HDAC8-202ENST00000373556 704 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 DSCR3-204ENST00000399001 821 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 CYSRT1-201ENST00000409414 1297 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 SAPCD2-201ENST00000409687 3848 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 MEP1AP4-201ENST00000423244 1087 ntBASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AL845321.1-202ENST00000432011 786 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC016683.1-202ENST00000438409 583 ntTSL 4 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 BMP7-AS1-201ENST00000445956 436 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 FAM86LP-201ENST00000478302 853 ntBASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC021491.2-201ENST00000513017 607 ntTSL 3 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 REEP4-207ENST00000523293 913 ntTSL 3 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC009163.1-201ENST00000530512 573 ntTSL 4 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC104794.3-201ENST00000566840 1248 ntBASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 RRP7BP-205ENST00000566851 833 ntBASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC243773.2-203ENST00000612281 640 ntTSL 3 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 AC106028.4-201ENST00000614509 607 ntBASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 FKBP1C-201ENST00000370659 1579 ntAPPRIS P1 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 ZBTB17-201ENST00000375733 2770 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 ARVCF-203ENST00000406259 2871 ntAPPRIS ALT2 TSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 TOB2-201ENST00000327492 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 KIAA2026-201ENST00000381461 6884 ntTSL 5 BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 ZFYVE28-201ENST00000290974 4131 ntAPPRIS P3 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC13.9□□□□□ -0.18
TMEM43Q9BTV4 NKIRAS1-203ENST00000415901 1644 ntAPPRIS ALT1 TSL 5 BASIC13.9□□□□□ -0.19
TMEM43Q9BTV4 AC010327.3-201ENST00000591665 1643 ntTSL 2 BASIC13.9□□□□□ -0.19
TMEM43Q9BTV4 SAMD4A-208ENST00000555192 1337 ntTSL 1 (best) BASIC13.9□□□□□ -0.19
TMEM43Q9BTV4 ITGB2-206ENST00000397852 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ZNF256-201ENST00000282308 2172 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 CCNF-202ENST00000397066 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ERLIN2-205ENST00000518586 2623 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ALDOA-203ENST00000395248 2447 ntTSL 5 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 LILRP1-201ENST00000444199 1370 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 H2BFWT-201ENST00000217926 894 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 CIDEA-201ENST00000320477 828 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ZSCAN2-205ENST00000379358 906 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AL645937.2-201ENST00000396808 931 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 MRPS18AP1-201ENST00000414458 589 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 HSPB7-207ENST00000487046 844 ntAPPRIS ALT1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AC026410.3-201ENST00000514280 936 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 SPSB2-204ENST00000523102 1205 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ERGIC1-212ENST00000523291 586 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 SPSB2-205ENST00000524270 1236 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 PDZD3-212ENST00000531114 2996 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AC079296.1-201ENST00000531592 560 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 RNA5-8SN1-201ENST00000610460 153 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 RNA5-8SN5-202ENST00000612463 153 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 RNA5-8SN4-201ENST00000613359 153 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 RNA5-8SN5-201ENST00000619471 153 ntBASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ORC5-208ENST00000626700 344 ntTSL 3 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 ZNF596-201ENST00000308811 2783 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
TMEM43Q9BTV4 GRIN3A-201ENST00000361820 7770 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms