Protein–RNA interactions for Protein: Q99805

TM9SF2, Transmembrane 9 superfamily member 2, humanhuman

Predictions only

Length 663 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF2Q99805 UFL1-AS1-201ENST00000430796 548 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 PTPA-220ENST00000436883 532 ntTSL 4 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 AC100810.1-201ENST00000518822 978 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 RAB26-202ENST00000541451 944 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 TM6SF2-201ENST00000389363 1505 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 TPD52L2-202ENST00000346249 2297 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 HTR7-203ENST00000371719 3033 ntAPPRIS ALT1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 HOXB4-201ENST00000332503 3757 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 ADAMTS14-201ENST00000373207 5260 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 RUNX3-201ENST00000308873 3861 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 HIC2-202ENST00000407598 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 GGA1-206ENST00000406772 3205 ntTSL 2 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 TNIP1-217ENST00000523200 1743 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 CRYM-201ENST00000219599 1471 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 ANKRD18A-201ENST00000399703 4041 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
TM9SF2Q99805 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
TM9SF2Q99805 STXBP6-201ENST00000323944 4132 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 KIF1A-201ENST00000320389 8832 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 ARHGAP6-204ENST00000380718 3632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 TPO-201ENST00000329066 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 UBXN11-205ENST00000374221 1792 ntAPPRIS P4 TSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC126365.1-201ENST00000578585 1514 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 AL669831.1-201ENST00000506640 6432 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 SLC52A3-205ENST00000632431 2694 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 STPG3-201ENST00000388931 1207 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 SELENOM-202ENST00000402395 1054 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AZGP1P1-201ENST00000411909 902 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 COX5BP8-201ENST00000416911 349 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 GSAP-205ENST00000430584 600 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 TMEM44-AS1-203ENST00000453671 1119 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 RHOA-206ENST00000454011 889 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC104596.2-201ENST00000512793 793 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 LINC01184-209ENST00000514573 609 ntTSL 3 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC233702.7-201ENST00000536958 924 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 COQ7-202ENST00000544894 819 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC023310.3-201ENST00000557027 670 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC100756.1-201ENST00000562736 682 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 IGHV3OR16-13-201ENST00000562905 353 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC138749.3-201ENST00000567691 622 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 MRPS23-202ENST00000578444 580 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC129926.1-201ENST00000581944 614 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 YPEL2-205ENST00000585166 881 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC093726.1-201ENST00000608064 963 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC116165.1-201ENST00000611806 668 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 SNHG28-203ENST00000621242 708 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC007431.3-201ENST00000623221 587 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 B4GALT3-213ENST00000622395 2414 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 PEX26-205ENST00000610387 3924 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 ADCY7-203ENST00000537579 2090 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 NCAPH2-202ENST00000395698 1388 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 MON1B-203ENST00000545553 1814 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 APBB1-217ENST00000608645 1925 ntTSL 5 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.17□□□□□ -0.14
TM9SF2Q99805 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 CDK5RAP2-202ENST00000360190 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 PRF1-201ENST00000373209 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 CAMK2B-208ENST00000395747 1557 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 AC005840.4-201ENST00000541242 2494 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 AJ011931.1-201ENST00000618749 2492 ntBASIC14.17□□□□□ -0.14
TM9SF2Q99805 NDRG2-203ENST00000350792 2127 ntAPPRIS ALT1 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
TM9SF2Q99805 ESR2-209ENST00000555278 1883 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 SMARCA4-214ENST00000589677 5181 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 ANKRD46-205ENST00000520311 3270 ntAPPRIS P1 TSL 2 BASIC14.16□□□□□ -0.14
TM9SF2Q99805 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 TBC1D1-201ENST00000261439 5700 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
TM9SF2Q99805 ALOX12-AS1-201ENST00000399540 1730 ntTSL 2 BASIC14.16□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 66.1 ms