Protein–RNA interactions for Protein: Q96PZ7

CSMD1, CUB and sushi domain-containing protein 1, humanhuman

Predictions only

Length 3,565 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1Q96PZ7 ARHGEF16-202ENST00000378373 2211 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ZNF143-213ENST00000530463 2022 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 KRT8P31-201ENST00000504812 1408 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 LINC01815-202ENST00000641468 1409 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 M6PR-202ENST00000536844 2305 ntTSL 3 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AC007950.2-201ENST00000615045 2347 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 AC011477.6-201ENST00000604980 1927 ntBASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 CREB3L2-204ENST00000456390 2360 ntTSL 2 BASIC12.62□□□□□ -0.39
CSMD1Q96PZ7 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AL157392.3-204ENST00000440878 397 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 C17orf58-202ENST00000449250 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AC011462.4-201ENST00000616866 449 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 NOP16-211ENST00000621444 954 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 CCDC90B-203ENST00000525503 1919 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ARHGAP9-203ENST00000424809 2569 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 GRHPR-212ENST00000607784 1704 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 PIK3IP1-203ENST00000441972 2374 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 DNAJC2-203ENST00000379263 2167 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 SLC18A2-201ENST00000298472 3852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RASSF3-202ENST00000336061 1030 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 SYT3-201ENST00000338916 2915 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AL139010.1-202ENST00000452528 1041 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AC068831.3-201ENST00000553321 1858 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AP005899.1-201ENST00000579467 544 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ZNF175-204ENST00000596504 580 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AC244394.1-201ENST00000435000 1665 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 MFF-204ENST00000353339 2186 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 MFSD1-203ENST00000415822 2423 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FOXB1-201ENST00000396057 2957 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RBM4-203ENST00000398692 921 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RBM4-207ENST00000506523 654 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 CCNC-217ENST00000523985 958 ntTSL 2 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 AL590235.1-201ENST00000564650 861 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A21P-201ENST00000510875 1396 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A15P-201ENST00000514465 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A6P-201ENST00000515148 1394 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A16P-201ENST00000526662 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A9P-201ENST00000527940 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A5P-201ENST00000528738 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A14P-201ENST00000530386 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 FAM90A13P-201ENST00000534703 1395 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 RPS23-201ENST00000296674 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 LINC02447-202ENST00000501888 2146 ntBASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 CYTH2-214ENST00000641098 2721 ntAPPRIS ALT1 BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 ZNF324B-201ENST00000336614 2996 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
CSMD1Q96PZ7 TRMT2A-202ENST00000403707 2928 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 THEMIS2-203ENST00000373925 1650 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 SMIM25-203ENST00000425497 2010 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ESD-202ENST00000378720 1192 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC012507.1-201ENST00000454890 600 ntTSL 4 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AL049833.2-202ENST00000556773 626 ntTSL 3 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AC142086.5-202ENST00000562500 217 ntBASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 LINC02018-201ENST00000608169 1268 ntTSL 4 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 TBRG4-201ENST00000258770 2243 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 LUC7L3-202ENST00000393227 2284 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 AL928970.1-201ENST00000422679 2923 ntTSL 5 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 TGOLN2-205ENST00000409232 2235 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 CD74-202ENST00000353334 1449 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 ARHGEF1-204ENST00000378152 2986 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
CSMD1Q96PZ7 SEMA3B-212ENST00000616701 2958 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms