Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP53Q96M91 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC20.22■□□□□ 0.83
CFAP53Q96M91 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC20.22■□□□□ 0.83
CFAP53Q96M91 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP53Q96M91 SNX5-202ENST00000377768 2288 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
CFAP53Q96M91 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 JAKMIP1-204ENST00000409831 2371 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 LINC00691-201ENST00000432505 2232 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 ASAH1-210ENST00000520781 2245 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 LONP1-213ENST00000590729 2626 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 KLK11-201ENST00000319720 1198 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TPO-206ENST00000382269 1155 ntTSL 5 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 MB-205ENST00000406324 582 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 CAST-224ENST00000508830 2539 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 MEOX1-202ENST00000329168 2129 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 WDR45B-201ENST00000392325 2587 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 TCAF2P1-201ENST00000291129 2421 ntBASIC20.21■□□□□ 0.83
CFAP53Q96M91 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC20.21■□□□□ 0.83
CFAP53Q96M91 AC007743.1-201ENST00000596663 3075 ntTSL 2 BASIC20.21■□□□□ 0.83
CFAP53Q96M91 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.83
CFAP53Q96M91 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.83
CFAP53Q96M91 PCDHA4-203ENST00000530339 5251 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 SEMA7A-201ENST00000261918 3885 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 AC023090.2-201ENST00000625182 2110 ntBASIC20.2■□□□□ 0.82
CFAP53Q96M91 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PDE3A-201ENST00000359062 7576 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 ABCC1-201ENST00000399408 6594 ntTSL 5 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 ABCC1-202ENST00000399410 6552 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 SNX21-203ENST00000372541 771 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 AGTRAP-202ENST00000376627 1055 ntTSL 5 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PFN2-215ENST00000497148 743 ntTSL 4 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 RNA5SP412-201ENST00000516234 123 ntBASIC20.2■□□□□ 0.82
CFAP53Q96M91 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 OR10B1P-201ENST00000601666 907 ntBASIC20.2■□□□□ 0.82
CFAP53Q96M91 SMURF2-201ENST00000262435 2918 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 VSX2-201ENST00000261980 2995 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PDE4A-203ENST00000380702 4781 ntAPPRIS P4 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 PCDHA3-202ENST00000532566 4594 ntBASIC20.2■□□□□ 0.82
CFAP53Q96M91 VSTM2A-204ENST00000407838 3112 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 IQCA1L-203ENST00000615129 2606 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
CFAP53Q96M91 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
CFAP53Q96M91 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 KCNJ2-202ENST00000535240 1685 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ACP2-205ENST00000527256 1499 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
CFAP53Q96M91 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC20.19■□□□□ 0.82
CFAP53Q96M91 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC20.19■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 33.6 ms