Protein–RNA interactions for Protein: Q96FC9

DDX11, ATP-dependent DNA helicase DDX11, humanhuman

Predictions only

Length 970 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11Q96FC9 GPER1-201ENST00000297469 2778 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
DDX11Q96FC9 REXO1L2P-201ENST00000425429 2069 ntBASIC18.07■□□□□ 0.48
DDX11Q96FC9 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 HEMK1-201ENST00000232854 6087 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 CNN3-207ENST00000545882 1902 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 TACR3-201ENST00000304883 5190 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 DIABLO-203ENST00000353548 1345 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 KCNG4-202ENST00000568181 2199 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 SFI1-209ENST00000443011 3579 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 PHACTR1-202ENST00000379329 707 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 LINC01534-201ENST00000425254 815 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 TREX1-201ENST00000433541 1105 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 HOXB-AS1-201ENST00000435312 806 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 KRT18P43-201ENST00000469825 1281 ntBASIC18.06■□□□□ 0.48
DDX11Q96FC9 LINC02212-201ENST00000515243 2130 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 ENPP7P5-201ENST00000541031 1031 ntBASIC18.06■□□□□ 0.48
DDX11Q96FC9 RORA-AS1-205ENST00000559824 761 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 APRT-204ENST00000563655 709 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 HAUS2-207ENST00000568846 709 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 MIR5189-201ENST00000577370 114 ntBASIC18.06■□□□□ 0.48
DDX11Q96FC9 TBCB-211ENST00000589996 724 ntTSL 3 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 AL022328.1-201ENST00000610050 478 ntBASIC18.06■□□□□ 0.48
DDX11Q96FC9 AC247036.4-201ENST00000632099 353 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 ATP6V1B1-202ENST00000412314 1805 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 GPI-205ENST00000586425 1799 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 SAFB2-201ENST00000252542 3371 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 LENG8-209ENST00000616932 2825 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 CYP2AB1P-202ENST00000454440 1456 ntBASIC18.06■□□□□ 0.48
DDX11Q96FC9 EID3-201ENST00000527879 1467 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 PEX11B-201ENST00000369306 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 AMPD3-203ENST00000396554 3806 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
DDX11Q96FC9 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 DMTN-206ENST00000443491 2415 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
DDX11Q96FC9 KCNT1-208ENST00000488444 3696 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 C22orf34-201ENST00000343999 2816 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ST14-201ENST00000278742 3539 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 STAMBPL1-204ENST00000371927 4184 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 PDE3B-202ENST00000455098 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 SCAMP2-201ENST00000268099 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 MOG-215ENST00000376888 1529 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 MAX-204ENST00000358402 1973 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ANKRD19P-201ENST00000338192 862 ntBASIC18.05■□□□□ 0.48
DDX11Q96FC9 SHBG-202ENST00000380450 1271 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 SOCS2P1-201ENST00000417727 557 ntBASIC18.05■□□□□ 0.48
DDX11Q96FC9 RPS24-203ENST00000435275 656 ntAPPRIS ALT1 TSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC096536.1-201ENST00000443284 440 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 LINC01939-201ENST00000445279 694 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 PFN2-205ENST00000461868 613 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC022494.1-201ENST00000466044 728 ntBASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC082651.1-201ENST00000478468 832 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC092658.1-201ENST00000505836 891 ntBASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ELOF1-208ENST00000591912 899 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 RPS24-214ENST00000613865 538 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 PCDHGC3-204ENST00000617222 731 ntTSL 3 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 OR4C6-202ENST00000641251 1058 ntAPPRIS P1 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 KCTD1-203ENST00000417602 1705 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 AC118344.1-201ENST00000378432 1462 ntTSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 CCNL1-202ENST00000295926 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 DUSP11-201ENST00000272444 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 E2F6-212ENST00000546212 3191 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 CAVIN1-201ENST00000357037 3828 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 B4GALNT3-201ENST00000266383 5068 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
DDX11Q96FC9 LMNA-201ENST00000347559 3137 ntTSL 5 BASIC18.05■□□□□ 0.48
DDX11Q96FC9 INTS4P2-202ENST00000614726 2019 ntBASIC18.05■□□□□ 0.48
DDX11Q96FC9 KIAA1211-201ENST00000264229 4109 ntAPPRIS P2 TSL 2 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
DDX11Q96FC9 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC18.04■□□□□ 0.48
DDX11Q96FC9 AC025674.2-201ENST00000522622 2971 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms