Protein–RNA interactions for Protein: Q96DM1

PGBD4, PiggyBac transposable element-derived protein 4, humanhuman

Predictions only

Length 585 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PGBD4Q96DM1 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 AL121944.1-201ENST00000605945 686 ntTSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 C6orf223-201ENST00000336600 3581 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 SELPLG-201ENST00000228463 1704 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 GLS2-201ENST00000311966 2623 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 CLUHP2-201ENST00000426660 1303 ntBASIC16.41■□□□□ 0.22
PGBD4Q96DM1 ROBO3-201ENST00000397801 4569 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 ROBO3-220ENST00000538940 4551 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 GMPR2-231ENST00000620807 1910 ntTSL 5 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
PGBD4Q96DM1 EIF4G1-203ENST00000350481 4990 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 SLC25A45-214ENST00000534028 2432 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LINC00658-202ENST00000420529 1542 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 ZNF750-202ENST00000572562 1513 ntTSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 EIF4G1-209ENST00000414031 5569 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 CCDC187-205ENST00000638797 10126 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 NEFL-203ENST00000619417 1879 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AC010424.3-201ENST00000635510 1745 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 CICP11-201ENST00000434745 2827 ntBASIC16.4■□□□□ 0.22
PGBD4Q96DM1 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 TMC4-210ENST00000619895 2373 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AC026495.1-203ENST00000557528 906 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AC008537.4-201ENST00000595728 1103 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 SNX12-206ENST00000622259 661 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AL139099.5-201ENST00000635274 300 ntBASIC16.4■□□□□ 0.22
PGBD4Q96DM1 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 AC019205.2-202ENST00000441363 2403 ntTSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 TK1-201ENST00000301634 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 KRT8P4-201ENST00000509735 1454 ntBASIC16.4■□□□□ 0.22
PGBD4Q96DM1 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 MGAT4B-202ENST00000337755 3027 ntTSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
PGBD4Q96DM1 CKAP4-201ENST00000378026 3093 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
PGBD4Q96DM1 HAUS2-208ENST00000568876 1702 ntTSL 4 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 MIR137HG-202ENST00000424528 2639 ntTSL 2 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 SLC29A1-206ENST00000371755 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 NPL-204ENST00000367554 3027 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 AVL9-201ENST00000318709 6982 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 POLI-208ENST00000579534 6133 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 STIP1-201ENST00000305218 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 GORAB-202ENST00000367763 2189 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 ZBTB11-AS1-201ENST00000609682 2743 ntBASIC16.39■□□□□ 0.21
PGBD4Q96DM1 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 AL136309.1-201ENST00000403917 691 ntBASIC16.39■□□□□ 0.21
PGBD4Q96DM1 AC026434.2-201ENST00000506094 1078 ntBASIC16.39■□□□□ 0.21
PGBD4Q96DM1 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 USH1C-202ENST00000318024 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 CDH7-203ENST00000536984 3766 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 AC092850.2-201ENST00000623821 2697 ntBASIC16.39■□□□□ 0.21
PGBD4Q96DM1 PITX2-205ENST00000394598 1906 ntAPPRIS ALT1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 SLC12A9-201ENST00000354161 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
PGBD4Q96DM1 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 TARBP2-203ENST00000456234 1368 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PGBD4Q96DM1 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms