Protein–RNA interactions for Protein: Q8NEF9

SRFBP1, Serum response factor-binding protein 1, humanhuman

Known RBP Predictions only

Length 429 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1Q8NEF9 MAGEC1-202ENST00000406005 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 SPATA3-204ENST00000433428 856 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AC140481.1-201ENST00000448777 706 ntTSL 3 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AC013451.1-201ENST00000554552 518 ntTSL 4 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 PTPN9-206ENST00000618819 7813 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AP002414.2-201ENST00000591780 3365 ntBASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 MARS-233ENST00000628866 2583 ntTSL 5 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 AMT-202ENST00000395338 1831 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 MED29-204ENST00000599213 2490 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 SYT5-201ENST00000354308 3792 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
SRFBP1Q8NEF9 RAI2-204ENST00000451717 2224 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ZNF398-205ENST00000491174 2232 ntTSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 GPRASP1-205ENST00000537097 5980 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 HBP1-201ENST00000222574 2829 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 CIAPIN1-201ENST00000394391 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PTPN13-203ENST00000427191 8487 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ALDH3B2-201ENST00000349015 2649 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ACOT7-210ENST00000608083 1403 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ACE3P-201ENST00000423435 1973 ntBASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 LIMS2-205ENST00000409455 2500 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 LINC01101-201ENST00000622953 1884 ntBASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 AKAP1-201ENST00000314126 2380 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 MRPS17-201ENST00000285298 1845 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 FANK1-204ENST00000368695 1296 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 DGCR5-201ENST00000399539 862 ntBASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 TGFA-205ENST00000444975 985 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ZSCAN2-213ENST00000541040 965 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ZNF710-AS1-201ENST00000558334 1168 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 LINC02109-201ENST00000565798 869 ntTSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PAM16-204ENST00000571941 674 ntTSL 3 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 AP005482.2-201ENST00000587889 310 ntTSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 RAB11B-202ENST00000594216 894 ntTSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 MPC2-202ENST00000367846 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 SETD1B-203ENST00000604567 5969 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 SUSD5-201ENST00000309558 5008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ABCA7-203ENST00000435683 6211 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 IL1RN-203ENST00000361779 1922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 ZNF32-AS3-201ENST00000458063 1932 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
SRFBP1Q8NEF9 AC020915.1-201ENST00000413518 1469 ntAPPRIS ALT2 TSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 ISCA2-204ENST00000556816 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 SBF1P1-201ENST00000444527 5631 ntBASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 GLI2-203ENST00000361492 6768 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 PTPRU-205ENST00000460170 5337 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 ACTL7B-201ENST00000374667 2379 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 NGF-201ENST00000369512 1047 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 LDLRAD1-201ENST00000371360 785 ntAPPRIS P3 TSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 TEX26-AS1-201ENST00000411835 1203 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AC012531.3-201ENST00000513209 777 ntAPPRIS P1 TSL 3 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AC022616.1-201ENST00000518688 554 ntBASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 EEF1D-207ENST00000524624 1084 ntAPPRIS ALT2 TSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 AC005342.2-201ENST00000544163 315 ntTSL 3 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 ZNF180-204ENST00000586637 1023 ntTSL 5 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC14.5□□□□□ -0.09
SRFBP1Q8NEF9 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 82.7 ms