Protein–RNA interactions for Protein: Q6DN03

HIST2H2BC, Putative histone H2B type 2-C, humanhuman

Predictions only

Length 193 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST2H2BCQ6DN03 TMTC1-206ENST00000551659 4228 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 SULT1A1-201ENST00000314752 1162 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 DYNLT1-201ENST00000367085 774 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 JPT2-203ENST00000382711 894 ntTSL 4 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 PPP1R7-205ENST00000404405 1009 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 AL451105.2-201ENST00000413763 1234 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 RPL14-203ENST00000416518 812 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 RHBDD2-203ENST00000428119 1274 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 AL731661.1-201ENST00000438217 758 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LINC01563-201ENST00000456235 750 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 RN7SL582P-201ENST00000491078 279 ntBASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 AC138701.2-201ENST00000553634 226 ntBASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 AC018846.1-201ENST00000568231 183 ntBASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 TNFRSF12A-204ENST00000573001 648 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 PGPEP1-206ENST00000597431 545 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 ANKRD20A21P-201ENST00000611282 517 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LINC00923-205ENST00000615399 932 ntTSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 TMPRSS9-205ENST00000613480 2568 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 APBB1-202ENST00000311051 2619 ntAPPRIS P3 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LINC01815-202ENST00000641468 1409 ntBASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 OXA1L-212ENST00000604262 1571 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 REM1-201ENST00000201979 1665 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 ARNTL2-208ENST00000544915 6785 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 SIGLEC6-205ENST00000425629 1852 ntAPPRIS P4 TSL 2 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 RASL11B-201ENST00000248706 1995 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 SLC27A5-207ENST00000601355 1987 ntAPPRIS ALT2 TSL 2 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 ANTXRL-205ENST00000620264 2206 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 CCDC136-212ENST00000487361 2268 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 FOXO3-201ENST00000343882 7308 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
HIST2H2BCQ6DN03 IGSF9-206ENST00000611023 2663 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 TUBGCP6-204ENST00000439308 6078 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 STK40-202ENST00000373129 3846 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 FBXL12-201ENST00000247977 1852 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 RNF128-201ENST00000255499 2817 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 UCN2-201ENST00000273610 1481 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 MRTO4-201ENST00000330263 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 NUDT2-202ENST00000379155 1002 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 PPP1R3G-201ENST00000405617 4907 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 LHCGR-204ENST00000405626 2073 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 POLR3H-204ENST00000407461 802 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 DDX39B-AS1-208ENST00000420520 516 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AL512622.1-202ENST00000443922 478 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 RN7SL846P-201ENST00000467429 292 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AC087071.1-201ENST00000469264 427 ntTSL 2 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 WASH7P-201ENST00000488147 1351 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 CHCHD2P2-201ENST00000503744 321 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 FAM218A-201ENST00000513876 2175 ntAPPRIS P1 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AC114947.1-202ENST00000514136 344 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 PSMD13-212ENST00000532097 1991 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 SPDYE6-201ENST00000563237 1691 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AL590235.1-201ENST00000564650 861 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 BRSK1-203ENST00000585418 1104 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AP005264.3-201ENST00000592370 485 ntTSL 5 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 MARK2P16-201ENST00000605714 1723 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AC011462.4-201ENST00000616866 449 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AL512324.3-201ENST00000619383 882 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AC018629.1-201ENST00000623381 1736 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 AL603764.1-201ENST00000636452 321 ntBASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 KIAA0319L-201ENST00000325722 4789 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 BHLHE41-201ENST00000242728 3837 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 DDHD1-202ENST00000357758 5603 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
HIST2H2BCQ6DN03 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
HIST2H2BCQ6DN03 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms