Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 APOA2-204ENST00000464492 530 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 OARD1-212ENST00000482515 832 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 IGHV3OR16-9-202ENST00000558425 288 ntAPPRIS ALT2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AP005329.1-201ENST00000578800 1035 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC060234.2-201ENST00000428825 1610 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC011455.3-201ENST00000599996 1967 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AL596257.1-201ENST00000641463 2694 ntBASIC18.17■□□□□ 0.5
RFX7Q2KHR2 FAM103A1-201ENST00000304191 1568 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CIAPIN1-213ENST00000569370 1559 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CD68-201ENST00000250092 1878 ntAPPRIS P3 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC009961.1-203ENST00000607836 2520 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 PDGFB-201ENST00000331163 3497 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 NFYA-202ENST00000353205 1660 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CLUHP2-201ENST00000426660 1303 ntBASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 CFAP53-201ENST00000398545 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AL157392.1-201ENST00000412388 373 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC006003.1-201ENST00000448541 613 ntTSL 4 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 FXYD6-217ENST00000584394 669 ntTSL 3 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 WDR20-205ENST00000424963 2695 ntTSL 5 BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
RFX7Q2KHR2 ARHGEF28-212ENST00000513042 6273 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 KIFC3-205ENST00000540079 2781 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 UGT8-201ENST00000310836 4084 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 SRPRA-206ENST00000532259 2453 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 CICP14-201ENST00000629111 2732 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 VTN-201ENST00000226218 2149 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 MYB-209ENST00000442647 3304 ntAPPRIS ALT1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 DTNB-228ENST00000496972 2328 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 B3GAT1-201ENST00000312527 3652 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 MED26-201ENST00000263390 3174 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 TPM3P8-201ENST00000330554 643 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 PRDX5-203ENST00000352435 596 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 RN7SKP230-201ENST00000365642 335 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 PSTK-202ENST00000405485 1047 ntAPPRIS P2 TSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AC004898.1-201ENST00000451057 766 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AC131206.1-201ENST00000538078 1211 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 AC138466.3-201ENST00000619983 221 ntBASIC18.16■□□□□ 0.5
RFX7Q2KHR2 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC18.16■□□□□ 0.5
RFX7Q2KHR2 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 CCT4-201ENST00000394440 2520 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 AC099063.4-201ENST00000641099 1602 ntBASIC18.15■□□□□ 0.5
RFX7Q2KHR2 AL589740.1-203ENST00000433637 1984 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 ADD1-204ENST00000398123 2361 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 SLC44A2-203ENST00000586078 3784 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 NR4A1-204ENST00000394825 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
RFX7Q2KHR2 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 81.5 ms