Protein–RNA interactions for Protein: Q08945

SSRP1, FACT complex subunit SSRP1, humanhuman

Known RBP Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSRP1Q08945 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 DDHD2-205ENST00000520272 4532 ntAPPRIS P1 TSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 CRHR2-208ENST00000506074 3109 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 TGFB1-201ENST00000221930 2769 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 HSPB7-202ENST00000375718 2415 ntTSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 RPL39L-201ENST00000296277 756 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 ACTBP8-201ENST00000403258 1108 ntBASIC17.59■□□□□ 0.41
SSRP1Q08945 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC17.59■□□□□ 0.41
SSRP1Q08945 ACTG1P3-201ENST00000431775 1114 ntBASIC17.59■□□□□ 0.41
SSRP1Q08945 HYAL1-208ENST00000457214 1084 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 RAD51D-205ENST00000460118 1064 ntTSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 RN7SL752P-201ENST00000463779 287 ntBASIC17.59■□□□□ 0.41
SSRP1Q08945 AC022137.2-201ENST00000503482 481 ntBASIC17.59■□□□□ 0.41
SSRP1Q08945 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.59■□□□□ 0.41
SSRP1Q08945 RPS15-202ENST00000585665 467 ntTSL 3 BASIC17.59■□□□□ 0.41
SSRP1Q08945 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 AFAP1-201ENST00000358461 7516 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 WDR97-201ENST00000323662 6916 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 PPP2R5C-204ENST00000422945 4481 ntTSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 RIPK1-201ENST00000259808 4160 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 NCK2-203ENST00000393349 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 SCAMP4-202ENST00000409472 2394 ntTSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 DDX56-201ENST00000258772 2336 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 PTPN5-204ENST00000396170 3871 ntTSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 RSPO1-204ENST00000615459 2331 ntTSL 2 BASIC17.59■□□□□ 0.41
SSRP1Q08945 C17orf80-203ENST00000359042 3645 ntAPPRIS P3 TSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 KDM3A-203ENST00000409556 4928 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
SSRP1Q08945 GRB2-201ENST00000316615 3181 ntTSL 5 BASIC17.59■□□□□ 0.41
SSRP1Q08945 CLEC16A-203ENST00000409790 6891 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.41
SSRP1Q08945 DDX49-201ENST00000247003 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 RTN4IP1-201ENST00000369063 1682 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 PIK3R1-211ENST00000521381 7011 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 C6orf120-201ENST00000332290 2667 ntAPPRIS P1 BASIC17.58■□□□□ 0.41
SSRP1Q08945 EEF1AKMT3-201ENST00000300209 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 GLIDR-202ENST00000625350 2588 ntTSL 1 (best) BASIC17.58■□□□□ 0.41
SSRP1Q08945 IBA57-201ENST00000366711 7817 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.41
SSRP1Q08945 ENOSF1-209ENST00000580982 1397 ntTSL 5 BASIC17.58■□□□□ 0.4
SSRP1Q08945 UHMK1-202ENST00000489294 8478 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 KRT8P35-201ENST00000483942 1338 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC17.58■□□□□ 0.4
SSRP1Q08945 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC17.58■□□□□ 0.4
SSRP1Q08945 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 DCAKD-201ENST00000310604 2122 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
SSRP1Q08945 SCGN-201ENST00000334979 704 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
SSRP1Q08945 SZT2-AS1-201ENST00000396885 699 ntTSL 3 BASIC17.58■□□□□ 0.4
SSRP1Q08945 C2orf15-202ENST00000409684 1058 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
SSRP1Q08945 EIF3FP3-201ENST00000434851 1086 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC17.58■□□□□ 0.4
SSRP1Q08945 GIMAP3P-201ENST00000495150 836 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 LDLRAD4-205ENST00000585931 2118 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 AC068473.4-201ENST00000587527 585 ntTSL 4 BASIC17.58■□□□□ 0.4
SSRP1Q08945 AL157392.3-207ENST00000601758 744 ntTSL 5 BASIC17.58■□□□□ 0.4
SSRP1Q08945 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.58■□□□□ 0.4
SSRP1Q08945 AC023090.2-201ENST00000625182 2110 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 AC018442.1-201ENST00000421439 2061 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 TIMP2-201ENST00000262768 3652 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 AC055811.4-201ENST00000624039 1754 ntBASIC17.58■□□□□ 0.4
SSRP1Q08945 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SSRP1Q08945 VGLL4-202ENST00000413604 1554 ntTSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 STAT1-203ENST00000392323 2723 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SSRP1Q08945 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC018529.2-202ENST00000611482 3087 ntBASIC17.57■□□□□ 0.4
SSRP1Q08945 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 IRF8-201ENST00000268638 3030 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 TMPO-203ENST00000343315 2465 ntTSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 NHS-201ENST00000380060 8761 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 P2RX5-TAX1BP3-201ENST00000550383 5905 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 HOPX-203ENST00000381255 1164 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 IFNL3-201ENST00000413851 656 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC243836.1-201ENST00000416696 438 ntTSL 3 BASIC17.57■□□□□ 0.4
SSRP1Q08945 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC011495.1-201ENST00000498085 584 ntBASIC17.57■□□□□ 0.4
SSRP1Q08945 SPDYE16-201ENST00000515340 858 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
SSRP1Q08945 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SSRP1Q08945 NEU3-203ENST00000529024 581 ntTSL 3 BASIC17.57■□□□□ 0.4
SSRP1Q08945 TDH-203ENST00000531764 1110 ntBASIC17.57■□□□□ 0.4
SSRP1Q08945 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 HOPX-210ENST00000553379 1001 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
SSRP1Q08945 HOPX-212ENST00000555760 1139 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SSRP1Q08945 HOPX-213ENST00000556376 1064 ntAPPRIS P1 TSL 3 BASIC17.57■□□□□ 0.4
SSRP1Q08945 AC010319.3-201ENST00000597028 470 ntBASIC17.57■□□□□ 0.4
SSRP1Q08945 RPSAP52-203ENST00000622976 1023 ntBASIC17.57■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms