Protein–RNA interactions for Protein: Q06546

GABPA, GA-binding protein alpha chain, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GABPAQ06546 MBD4-206ENST00000507208 2194 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
GABPAQ06546 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 ASTN2-202ENST00000313400 4747 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 PLPP3-201ENST00000371250 3292 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 TMEM143-203ENST00000435956 2272 ntTSL 2 BASIC17.62■□□□□ 0.41
GABPAQ06546 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 SPATC1-202ENST00000447830 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 PDZK1IP1-201ENST00000294338 846 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 AK6-201ENST00000380818 1183 ntTSL 2 BASIC17.62■□□□□ 0.41
GABPAQ06546 SEPT12-202ENST00000396693 1156 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 KLF3-AS1-204ENST00000505240 567 ntTSL 4 BASIC17.62■□□□□ 0.41
GABPAQ06546 AC131206.1-201ENST00000538078 1211 ntBASIC17.62■□□□□ 0.41
GABPAQ06546 CD63-214ENST00000552692 949 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 AC008825.2-201ENST00000603374 718 ntBASIC17.62■□□□□ 0.41
GABPAQ06546 AC068790.8-201ENST00000618862 504 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
GABPAQ06546 KLF3-AS1-207ENST00000620339 558 ntTSL 4 BASIC17.62■□□□□ 0.41
GABPAQ06546 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC17.62■□□□□ 0.41
GABPAQ06546 CGGBP1-201ENST00000309534 4495 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 PUS7-202ENST00000469408 2356 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 ATP6AP2-213ENST00000636251 1877 ntAPPRIS ALT2 TSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 ARMC6-206ENST00000535612 2488 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 B3GALNT1-203ENST00000392781 3606 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
GABPAQ06546 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
GABPAQ06546 MBTD1-201ENST00000376381 1420 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 DLX4-202ENST00000411890 1404 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 TLDC2-201ENST00000217320 2083 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 FKBP6-201ENST00000252037 1500 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC17.62■□□□□ 0.41
GABPAQ06546 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
GABPAQ06546 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 SMARCD1-202ENST00000394963 3658 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 AC022532.1-201ENST00000624563 1728 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 HORMAD1-201ENST00000322343 1771 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 DDIAS-203ENST00000525361 1830 ntAPPRIS ALT2 TSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 KLC2-203ENST00000394066 2591 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 CICP6-201ENST00000457191 2729 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 ACE3P-201ENST00000423435 1973 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 SDCCAG3P2-201ENST00000326105 1023 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 NCR3-201ENST00000340027 1042 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 MRPL43-206ENST00000370236 866 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 MRPL43-207ENST00000370241 824 ntTSL 5 BASIC17.61■□□□□ 0.41
GABPAQ06546 RBM38-204ENST00000371219 760 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 FGF13-204ENST00000436198 1165 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 RNMTL1P1-201ENST00000454103 560 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 GCOM2-201ENST00000509133 1104 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 HNRNPA1P36-201ENST00000521313 955 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 RCE1-204ENST00000525356 1270 ntTSL 5 BASIC17.61■□□□□ 0.41
GABPAQ06546 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC17.61■□□□□ 0.41
GABPAQ06546 LGALS3BP-202ENST00000585407 936 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 AC132192.2-201ENST00000596206 1147 ntBASIC17.61■□□□□ 0.41
GABPAQ06546 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC17.61■□□□□ 0.41
GABPAQ06546 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 TAOK2-203ENST00000416441 4780 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC17.61■□□□□ 0.41
GABPAQ06546 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 EPS15L1-207ENST00000594975 2489 ntTSL 2 BASIC17.61■□□□□ 0.41
GABPAQ06546 TFR2-202ENST00000431692 2631 ntTSL 5 BASIC17.61■□□□□ 0.41
GABPAQ06546 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 SNCAIP-207ENST00000504884 1885 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
GABPAQ06546 YARS-201ENST00000373477 3238 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
GABPAQ06546 SF3B4-201ENST00000271628 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 SLC6A2-204ENST00000561820 2268 ntTSL 5 BASIC17.6■□□□□ 0.41
GABPAQ06546 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 DHODH-201ENST00000219240 2426 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 FLOT2-201ENST00000394906 2756 ntTSL 5 BASIC17.6■□□□□ 0.41
GABPAQ06546 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC17.6■□□□□ 0.41
GABPAQ06546 TEX13B-201ENST00000302917 1248 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 AC092800.1-201ENST00000449492 579 ntTSL 2 BASIC17.6■□□□□ 0.41
GABPAQ06546 AC005077.2-201ENST00000449786 690 ntBASIC17.6■□□□□ 0.41
GABPAQ06546 TUBB8P8-201ENST00000458717 1058 ntBASIC17.6■□□□□ 0.41
GABPAQ06546 ADM-202ENST00000524948 584 ntTSL 2 BASIC17.6■□□□□ 0.41
GABPAQ06546 NAPSB-201ENST00000525179 678 ntTSL 3 BASIC17.6■□□□□ 0.41
GABPAQ06546 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC17.6■□□□□ 0.41
GABPAQ06546 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC17.6■□□□□ 0.41
GABPAQ06546 AF111169.4-201ENST00000556368 749 ntTSL 2 BASIC17.6■□□□□ 0.41
GABPAQ06546 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
GABPAQ06546 PCBP2-OT1-201ENST00000634357 590 ntBASIC17.6■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 34.9 ms