Protein–RNA interactions for Protein: P56277

CMC4, Cx9C motif-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 68 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CMC4P56277 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 RHCE-206ENST00000413854 1198 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 PRAP1-201ENST00000433452 971 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.29□□□□□ -0.6
CMC4P56277 BCRP2-202ENST00000447763 634 ntBASIC11.29□□□□□ -0.6
CMC4P56277 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC11.29□□□□□ -0.6
CMC4P56277 BCRP6-201ENST00000510112 632 ntBASIC11.29□□□□□ -0.6
CMC4P56277 BCRP7-201ENST00000511549 544 ntBASIC11.29□□□□□ -0.6
CMC4P56277 RNA5SP486-201ENST00000515961 83 ntBASIC11.29□□□□□ -0.6
CMC4P56277 BRF2-202ENST00000520601 1192 ntTSL 3 BASIC11.29□□□□□ -0.6
CMC4P56277 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC11.29□□□□□ -0.6
CMC4P56277 AC025279.2-201ENST00000569730 653 ntBASIC11.29□□□□□ -0.6
CMC4P56277 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 PRCD-204ENST00000586148 630 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 ENPP7P14-201ENST00000621765 1040 ntBASIC11.29□□□□□ -0.6
CMC4P56277 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 AL953897.1-201ENST00000376620 1868 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 ELMO1-209ENST00000448602 2621 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 C15orf59-204ENST00000569673 6573 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 INTS1-201ENST00000404767 6959 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC11.29□□□□□ -0.6
CMC4P56277 GABARAPL1-218ENST00000546017 2294 ntTSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 ZNF382-202ENST00000423582 2657 ntTSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 ANKRD33-201ENST00000301190 1935 ntTSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 PLVAP-201ENST00000252590 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 ZBTB17-216ENST00000537142 2511 ntTSL 2 BASIC11.29□□□□□ -0.6
CMC4P56277 GLUL-203ENST00000339526 3942 ntAPPRIS P1 TSL 1 (best) BASIC11.29□□□□□ -0.6
CMC4P56277 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 AC018665.1-201ENST00000622927 1362 ntBASIC11.28□□□□□ -0.6
CMC4P56277 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 KATNA1-203ENST00000367411 1984 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 SEZ6L-203ENST00000360929 6307 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 PARN-202ENST00000420015 2360 ntTSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 VTI1B-204ENST00000554659 5351 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 IGF2BP1-201ENST00000290341 8274 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 ARL6IP1-201ENST00000304414 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 AQP6-204ENST00000615425 2245 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 USP49-203ENST00000394253 9034 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 NBPF26-208ENST00000620612 4602 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 RPP40-202ENST00000380051 1483 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 GSN-206ENST00000394353 2311 ntTSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 AC092933.1-201ENST00000393644 945 ntBASIC11.28□□□□□ -0.6
CMC4P56277 PES1-204ENST00000402284 2144 ntTSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 SERF2-209ENST00000409646 559 ntTSL 4 BASIC11.28□□□□□ -0.6
CMC4P56277 HIST1H2BPS3-201ENST00000419683 341 ntBASIC11.28□□□□□ -0.6
CMC4P56277 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 FDPS-203ENST00000447866 1256 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 RHOXF1P1-201ENST00000454625 772 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 USP32P1-208ENST00000506594 1164 ntBASIC11.28□□□□□ -0.6
CMC4P56277 HOXC-AS3-201ENST00000509870 544 ntTSL 4 BASIC11.28□□□□□ -0.6
CMC4P56277 LINC02449-203ENST00000536034 451 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 AC018653.3-202ENST00000538062 735 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 KRT17P8-201ENST00000540749 863 ntBASIC11.28□□□□□ -0.6
CMC4P56277 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 AC023310.1-201ENST00000554836 735 ntBASIC11.28□□□□□ -0.6
CMC4P56277 AP005482.1-201ENST00000563722 1273 ntBASIC11.28□□□□□ -0.6
CMC4P56277 SNAI3-AS1-206ENST00000569786 588 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC11.28□□□□□ -0.6
CMC4P56277 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 AL160412.1-202ENST00000616819 663 ntTSL 4 BASIC11.28□□□□□ -0.6
CMC4P56277 MPP2-219ENST00000612133 4938 ntTSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 CADPS2-205ENST00000449022 4073 ntTSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 AL031595.1-201ENST00000623969 4709 ntBASIC11.28□□□□□ -0.6
CMC4P56277 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 FGR-202ENST00000374004 2350 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 GDF5-201ENST00000374369 2383 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 HOXD3-202ENST00000410016 2384 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 KLC1-206ENST00000389744 3250 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 C1QTNF2-201ENST00000393975 2414 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 AC004834.1-201ENST00000640784 2412 ntTSL 3 BASIC11.28□□□□□ -0.6
CMC4P56277 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 KRT8-205ENST00000546897 1755 ntAPPRIS P1 TSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 CBFB-201ENST00000290858 3136 ntAPPRIS P3 TSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 ARFIP1-204ENST00000429148 1599 ntTSL 2 BASIC11.28□□□□□ -0.6
CMC4P56277 PLXNB2-207ENST00000449103 6383 ntAPPRIS P1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 AFTPH-201ENST00000238855 4113 ntAPPRIS ALT1 TSL 5 BASIC11.28□□□□□ -0.6
CMC4P56277 FBLN7-203ENST00000409450 1394 ntTSL 1 (best) BASIC11.28□□□□□ -0.6
CMC4P56277 GBF1-201ENST00000369983 6403 ntAPPRIS P1 TSL 1 (best) BASIC11.28□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 67.7 ms