Protein–RNA interactions for Protein: P55283

CDH4, Cadherin-4, humanhuman

Predictions only

Length 916 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4P55283 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 TPO-206ENST00000382269 1155 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH4P55283 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 MORN2-204ENST00000409665 648 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.07
CDH4P55283 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH4P55283 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH4P55283 RPS2P32-201ENST00000439199 892 ntBASIC15.46■□□□□ 0.07
CDH4P55283 YBX1P6-201ENST00000442962 1002 ntBASIC15.46■□□□□ 0.07
CDH4P55283 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC15.46■□□□□ 0.07
CDH4P55283 BNIP3P42-201ENST00000454982 569 ntBASIC15.46■□□□□ 0.07
CDH4P55283 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 COX14-203ENST00000550487 739 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
CDH4P55283 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC15.46■□□□□ 0.07
CDH4P55283 AC025048.1-201ENST00000592317 542 ntTSL 4 BASIC15.46■□□□□ 0.07
CDH4P55283 BNIP3P29-201ENST00000598302 571 ntBASIC15.46■□□□□ 0.07
CDH4P55283 AC011447.5-201ENST00000616168 564 ntBASIC15.46■□□□□ 0.07
CDH4P55283 C11orf16-202ENST00000525780 1685 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
CDH4P55283 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 NIN-203ENST00000382041 6496 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
CDH4P55283 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC15.46■□□□□ 0.06
CDH4P55283 MAPT-213ENST00000571987 2277 ntAPPRIS P4 TSL 5 BASIC15.46■□□□□ 0.06
CDH4P55283 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CDH4P55283 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDH4P55283 TMEM57-202ENST00000399766 3294 ntTSL 1 (best) BASIC15.46■□□□□ 0.06
CDH4P55283 TSEN2-201ENST00000284995 2381 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
CDH4P55283 FGF1-201ENST00000337706 1469 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.06
CDH4P55283 MCM7-202ENST00000343023 1968 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ABHD14B-201ENST00000315877 2236 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH4P55283 SLC35G5-201ENST00000382435 1321 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDH4P55283 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
CDH4P55283 BRF1-203ENST00000379937 3314 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 HSPA12B-201ENST00000254963 3151 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 DYSF-207ENST00000409762 6727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 DYSF-211ENST00000429174 6739 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 EXOC3L1-201ENST00000314586 2510 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 ERRFI1-201ENST00000377482 3104 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ATG10-203ENST00000458350 1795 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 B3GNTL1-211ENST00000576599 1787 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 GHDC-207ENST00000587427 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ANGPTL8-201ENST00000252453 872 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 TSPO-202ENST00000337554 881 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 SNX21-203ENST00000372541 771 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 C9orf16-201ENST00000372994 713 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 ZFAND2B-203ENST00000409206 1159 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 SERF2-209ENST00000409646 559 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH4P55283 AL645941.1-201ENST00000415875 338 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH4P55283 FAM21FP-201ENST00000426241 1131 ntBASIC15.45■□□□□ 0.06
CDH4P55283 SGK2-207ENST00000426287 1182 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ZNF589-204ENST00000440261 917 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC15.45■□□□□ 0.06
CDH4P55283 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 PFN2-215ENST00000497148 743 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH4P55283 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH4P55283 RNA5SP412-201ENST00000516234 123 ntBASIC15.45■□□□□ 0.06
CDH4P55283 PDP1-203ENST00000517764 2140 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 AC109479.1-201ENST00000519603 624 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC15.45■□□□□ 0.06
CDH4P55283 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDH4P55283 AC106820.3-201ENST00000561653 397 ntBASIC15.45■□□□□ 0.06
CDH4P55283 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 SLC35G4-201ENST00000588001 1017 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
CDH4P55283 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 ANGPTL8-204ENST00000616433 1223 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC15.45■□□□□ 0.06
CDH4P55283 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 ANXA6-215ENST00000523714 2451 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 TDRP-205ENST00000613071 3421 ntAPPRIS P1 TSL 3 BASIC15.45■□□□□ 0.06
CDH4P55283 MAPK3-212ENST00000484663 2567 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 PUDP-202ENST00000412827 1376 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.45■□□□□ 0.06
CDH4P55283 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
CDH4P55283 RPA3-201ENST00000223129 2020 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH4P55283 RCOR3-203ENST00000419091 2041 ntAPPRIS P1 TSL 2 BASIC15.44■□□□□ 0.06
CDH4P55283 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
CDH4P55283 FANCA-213ENST00000563673 1694 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH4P55283 FKBP4P6-201ENST00000457486 1332 ntBASIC15.44■□□□□ 0.06
CDH4P55283 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
CDH4P55283 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.44■□□□□ 0.06
CDH4P55283 HARS2-202ENST00000448069 1426 ntTSL 2 BASIC15.44■□□□□ 0.06
CDH4P55283 INPP5D-201ENST00000359570 5274 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms