Protein–RNA interactions for Protein: P48444

ARCN1, Coatomer subunit delta, humanhuman

Known RBP Predictions only

Length 511 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARCN1P48444 ELK1P1-201ENST00000485699 580 ntBASIC15.2■□□□□ 0.02
ARCN1P48444 AC124283.3-201ENST00000570869 594 ntBASIC15.2■□□□□ 0.02
ARCN1P48444 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.2■□□□□ 0.02
ARCN1P48444 AC093726.1-201ENST00000608064 963 ntBASIC15.2■□□□□ 0.02
ARCN1P48444 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC15.2■□□□□ 0.02
ARCN1P48444 AL358472.5-202ENST00000641448 1267 ntBASIC15.2■□□□□ 0.02
ARCN1P48444 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 TGFB1I1-214ENST00000567607 1770 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 KIF22-208ENST00000569382 2020 ntTSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 C15orf52-206ENST00000559313 3022 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 KCP-208ENST00000620378 4515 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 GABARAP-201ENST00000302386 1634 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 DCUN1D2-201ENST00000332592 2626 ntTSL 2 BASIC15.2■□□□□ 0.02
ARCN1P48444 TMEM237-202ENST00000409444 5592 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 FERMT3-201ENST00000279227 2489 ntAPPRIS P4 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 TPGS2-201ENST00000334295 4030 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 DLGAP4-205ENST00000401952 4881 ntAPPRIS P4 TSL 5 BASIC15.2■□□□□ 0.02
ARCN1P48444 DBR1-201ENST00000260803 2666 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
ARCN1P48444 NBPF9-207ENST00000615421 5835 ntAPPRIS P2 TSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 TBC1D2-201ENST00000342112 3046 ntTSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 AC113367.3-201ENST00000508316 1912 ntBASIC15.19■□□□□ 0.02
ARCN1P48444 LENG8-208ENST00000610347 5789 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ARCN1P48444 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 MIF4GD-208ENST00000579297 1419 ntTSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 SLC52A3-202ENST00000381944 3060 ntTSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC15.19■□□□□ 0.02
ARCN1P48444 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 PPM1B-204ENST00000378551 3877 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 SPATA33-210ENST00000611218 1546 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 EXOC6B-209ENST00000634650 2583 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 MRPL53-201ENST00000258105 1162 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 ETFB-201ENST00000309244 900 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 AP1S3-204ENST00000409375 552 ntTSL 3 BASIC15.19■□□□□ 0.02
ARCN1P48444 NUS1P3-201ENST00000423502 862 ntBASIC15.19■□□□□ 0.02
ARCN1P48444 AC134915.1-201ENST00000426461 574 ntBASIC15.19■□□□□ 0.02
ARCN1P48444 AL442647.2-201ENST00000429864 857 ntBASIC15.19■□□□□ 0.02
ARCN1P48444 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC15.19■□□□□ 0.02
ARCN1P48444 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.19■□□□□ 0.02
ARCN1P48444 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC15.19■□□□□ 0.02
ARCN1P48444 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
ARCN1P48444 BCRP3-202ENST00000621462 1021 ntTSL 3 BASIC15.19■□□□□ 0.02
ARCN1P48444 FKBP4-208ENST00000630279 156 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 WDR45-230ENST00000634559 1192 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 TTC6-206ENST00000553443 5833 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 SCYL1-201ENST00000270176 2642 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 AGER-206ENST00000375070 1463 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 SUGP2-202ENST00000337018 3640 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.19■□□□□ 0.02
ARCN1P48444 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.19■□□□□ 0.02
ARCN1P48444 PHRF1-203ENST00000416188 5227 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
ARCN1P48444 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 CHEK2-204ENST00000382580 1971 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 ZNF683-201ENST00000349618 1610 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 RALGDS-201ENST00000372047 3598 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 FP565260.6-204ENST00000620528 1640 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 PPP2CA-203ENST00000481195 4649 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 TAP2-205ENST00000620123 5676 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 TSEN2-205ENST00000444864 2697 ntTSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 ARHGEF3-212ENST00000495373 2024 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 GALT-202ENST00000450095 1280 ntTSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
ARCN1P48444 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC15.18■□□□□ 0.02
ARCN1P48444 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 AC092552.1-201ENST00000547243 906 ntBASIC15.18■□□□□ 0.02
ARCN1P48444 AC138028.3-201ENST00000561699 213 ntTSL 3 BASIC15.18■□□□□ 0.02
ARCN1P48444 NOP53-AS1-201ENST00000602048 540 ntTSL 4 BASIC15.18■□□□□ 0.02
ARCN1P48444 LINC01663-201ENST00000614596 535 ntTSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 BX539320.1-201ENST00000623759 877 ntBASIC15.18■□□□□ 0.02
ARCN1P48444 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
ARCN1P48444 ERN2-202ENST00000457008 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 PSMD13-215ENST00000621534 1572 ntTSL 5 BASIC15.18■□□□□ 0.02
ARCN1P48444 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC15.18■□□□□ 0.02
ARCN1P48444 MFRP-201ENST00000360167 1663 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms