Protein–RNA interactions for Protein: P48230

TM4SF4, Transmembrane 4 L6 family member 4, humanhuman

Predictions only

Length 202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TM4SF4P48230 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.85■□□□□ 0.29
TM4SF4P48230 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 BMPER-201ENST00000297161 5031 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 JKAMP-207ENST00000554271 2137 ntTSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 MSTO1-202ENST00000368341 2245 ntTSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 HIST1H2AE-201ENST00000303910 509 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
TM4SF4P48230 HCG9-201ENST00000376800 663 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 GSTT2B-202ENST00000404172 819 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 Metazoa_SRP.9-201ENST00000415635 283 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 LINC01278-201ENST00000433061 529 ntTSL 3 BASIC16.84■□□□□ 0.29
TM4SF4P48230 AL158166.1-201ENST00000433110 371 ntTSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 AC093484.1-201ENST00000441875 477 ntTSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 RPL9-203ENST00000449470 1127 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 AC063952.3-201ENST00000467756 308 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 AC026470.1-201ENST00000478038 846 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 RN7SL582P-201ENST00000491078 279 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 AC034231.1-201ENST00000507251 537 ntTSL 4 BASIC16.84■□□□□ 0.29
TM4SF4P48230 TMEM14C-205ENST00000541412 1177 ntAPPRIS P1 TSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 AC090001.1-201ENST00000553194 467 ntTSL 3 BASIC16.84■□□□□ 0.29
TM4SF4P48230 ABHD17AP9-201ENST00000561925 548 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 AC005154.1-232ENST00000582549 556 ntTSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 AC006483.2-201ENST00000609813 515 ntBASIC16.84■□□□□ 0.29
TM4SF4P48230 LINC01278-206ENST00000610088 554 ntTSL 4 BASIC16.84■□□□□ 0.29
TM4SF4P48230 C20orf96-202ENST00000382369 1420 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.84■□□□□ 0.29
TM4SF4P48230 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 SLC22A6-203ENST00000421062 1560 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 OGFOD1-209ENST00000568397 1681 ntTSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 DRG2-201ENST00000225729 1964 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 NR2C1-201ENST00000330677 2014 ntTSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 FOSB-209ENST00000590335 2170 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
TM4SF4P48230 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
TM4SF4P48230 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM4SF4P48230 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM4SF4P48230 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM4SF4P48230 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.29
TM4SF4P48230 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.29
TM4SF4P48230 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
TM4SF4P48230 GINS2-201ENST00000253462 2673 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 PIGT-202ENST00000279036 2245 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 U2AF1L4-201ENST00000292879 729 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 PORCN-201ENST00000326194 1755 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 G6PD-201ENST00000369620 1799 ntTSL 5 BASIC16.83■□□□□ 0.28
TM4SF4P48230 UCK1-203ENST00000372211 2114 ntTSL 3 BASIC16.83■□□□□ 0.28
TM4SF4P48230 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 MIR645-201ENST00000385283 94 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 URI1-202ENST00000392271 3444 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.83■□□□□ 0.28
TM4SF4P48230 MIR1301-201ENST00000408518 82 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 F10-203ENST00000409306 1450 ntTSL 3 BASIC16.83■□□□□ 0.28
TM4SF4P48230 BRI3P1-201ENST00000440440 378 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 FKBP1B-205ENST00000452109 953 ntTSL 3 BASIC16.83■□□□□ 0.28
TM4SF4P48230 LINC01056-201ENST00000455711 1234 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 MINDY4B-201ENST00000465419 1383 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TM4SF4P48230 LINC02063-201ENST00000503415 566 ntTSL 4 BASIC16.83■□□□□ 0.28
TM4SF4P48230 MSC-AS1-204ENST00000518916 864 ntTSL 3 BASIC16.83■□□□□ 0.28
TM4SF4P48230 ENPP7P8-202ENST00000527856 1345 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 AC105219.2-201ENST00000527908 299 ntTSL 4 BASIC16.83■□□□□ 0.28
TM4SF4P48230 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 AC015712.5-201ENST00000558568 564 ntTSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 SRP14-204ENST00000558720 780 ntTSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 TEKT4P2-202ENST00000559466 1312 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 CD276-213ENST00000561213 2690 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 FAM192A-218ENST00000567439 1086 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 AL118522.1-201ENST00000611368 560 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 N4BP2L1-210ENST00000613078 2032 ntTSL 5 BASIC16.83■□□□□ 0.28
TM4SF4P48230 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 AC009145.4-201ENST00000625119 1294 ntBASIC16.83■□□□□ 0.28
TM4SF4P48230 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
TM4SF4P48230 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.83■□□□□ 0.28
TM4SF4P48230 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
TM4SF4P48230 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
TM4SF4P48230 TINF2-202ENST00000399423 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 LTF-202ENST00000417439 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 AL513523.2-202ENST00000427283 2040 ntBASIC16.82■□□□□ 0.28
TM4SF4P48230 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 ATP6V0D1-201ENST00000290949 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.82■□□□□ 0.28
TM4SF4P48230 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
TM4SF4P48230 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC16.82■□□□□ 0.28
TM4SF4P48230 TIPRL-202ENST00000367833 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 213 ms