Protein–RNA interactions for Protein: P43307

SSR1, Translocon-associated protein subunit alpha, humanhuman

Known RBP Predictions only

Length 286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1P43307 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 KRT18P43-201ENST00000469825 1281 ntBASIC16.25■□□□□ 0.19
SSR1P43307 PNOC-204ENST00000522209 1007 ntTSL 2 BASIC16.25■□□□□ 0.19
SSR1P43307 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC16.25■□□□□ 0.19
SSR1P43307 AP000721.1-201ENST00000535431 559 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 AL161757.4-201ENST00000554149 621 ntTSL 3 BASIC16.25■□□□□ 0.19
SSR1P43307 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC16.25■□□□□ 0.19
SSR1P43307 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC16.25■□□□□ 0.19
SSR1P43307 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 KCNT1-212ENST00000628528 7057 ntAPPRIS ALT2 TSL 2 BASIC16.25■□□□□ 0.19
SSR1P43307 SLC29A1-201ENST00000371708 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 FBXL19-201ENST00000338343 3965 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 CBFA2T3-201ENST00000268679 4477 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 ARHGAP45-201ENST00000313093 4273 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 SLC25A38-201ENST00000273158 2123 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 GPD2-208ENST00000438166 2457 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 AJ011931.1-201ENST00000618749 2492 ntBASIC16.25■□□□□ 0.19
SSR1P43307 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 USH1C-207ENST00000527720 2278 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SSR1P43307 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 TRAF6-201ENST00000348124 2558 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 TGIF2-202ENST00000373874 3432 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
SSR1P43307 MAPK7-203ENST00000395602 3059 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SSR1P43307 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC16.25■□□□□ 0.19
SSR1P43307 RAB3IP-204ENST00000378815 2386 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 TSC1-202ENST00000403810 1507 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 CNOT8-201ENST00000285896 2528 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 SEPT7-202ENST00000399034 4399 ntTSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 HPGD-202ENST00000296522 3027 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 COCH-203ENST00000460581 2688 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 AC087499.5-201ENST00000452760 1342 ntBASIC16.24■□□□□ 0.19
SSR1P43307 FBXO22-202ENST00000453211 1486 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 CEP76-201ENST00000262127 2939 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 KYAT1-202ENST00000320665 1623 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 SHC1-204ENST00000368450 3059 ntAPPRIS ALT1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 SHC1-205ENST00000368453 3062 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 NUP153-203ENST00000613258 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 UBAC2-AS1-201ENST00000426037 1771 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 CYB561-219ENST00000584031 3200 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 LMX1B-202ENST00000373474 5797 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 KLHL21-201ENST00000377658 4487 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 C16orf92-201ENST00000300575 895 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 LBH-203ENST00000404397 543 ntTSL 4 BASIC16.24■□□□□ 0.19
SSR1P43307 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 AL365255.1-202ENST00000413887 363 ntTSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 C1orf210-201ENST00000423420 629 ntAPPRIS P1 TSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 AC092580.3-201ENST00000430932 139 ntBASIC16.24■□□□□ 0.19
SSR1P43307 AL359815.1-201ENST00000457706 821 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 LY6E-204ENST00000519546 971 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 AC124067.4-202ENST00000522471 397 ntTSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 DUX4L27-201ENST00000554796 1261 ntBASIC16.24■□□□□ 0.19
SSR1P43307 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 AC104985.1-201ENST00000587528 507 ntTSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 AC005746.1-201ENST00000589244 672 ntTSL 3 BASIC16.24■□□□□ 0.19
SSR1P43307 AC025181.2-201ENST00000606994 802 ntBASIC16.24■□□□□ 0.19
SSR1P43307 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 AC100757.3-201ENST00000622361 1406 ntBASIC16.24■□□□□ 0.19
SSR1P43307 MROH4P-201ENST00000431302 1578 ntBASIC16.24■□□□□ 0.19
SSR1P43307 ZBTB7B-207ENST00000535420 3777 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 CTTN-202ENST00000346329 3272 ntAPPRIS P3 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 COL4A1-201ENST00000375820 6532 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 BMT2-201ENST00000297145 3981 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC16.24■□□□□ 0.19
SSR1P43307 TP73-209ENST00000603362 1668 ntTSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 MOCS1-201ENST00000340692 2747 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 WNT7B-201ENST00000339464 3919 ntAPPRIS P2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 STUM-202ENST00000366789 4093 ntAPPRIS ALT1 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC16.24■□□□□ 0.19
SSR1P43307 PARVB-201ENST00000338758 5429 ntAPPRIS P1 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.24■□□□□ 0.19
SSR1P43307 TSPOAP1-201ENST00000268893 7483 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.23■□□□□ 0.19
SSR1P43307 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 OGFOD3-201ENST00000313056 4287 ntAPPRIS P1 TSL 2 BASIC16.23■□□□□ 0.19
SSR1P43307 LINC02138-201ENST00000378340 1326 ntTSL 2 BASIC16.23■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms