Protein–RNA interactions for Protein: P35914

HMGCL, Hydroxymethylglutaryl-CoA lyase, mitochondrial, humanhuman

Predictions only

Length 325 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCLP35914 COL25A1-201ENST00000399126 2674 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 CICP24-201ENST00000605464 2705 ntBASIC15.07■□□□□ 0
HMGCLP35914 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 TJP2-212ENST00000636438 4689 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 MIIP-201ENST00000235332 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 RBFOX1-212ENST00000550418 4775 ntTSL 1 (best) BASIC15.07■□□□□ 0
HMGCLP35914 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.07■□□□□ 0
HMGCLP35914 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 HTR3A-202ENST00000355556 2331 ntTSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 MUTYH-234ENST00000528013 1662 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 MLST8-201ENST00000301724 1735 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 ZCCHC17-202ENST00000373714 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 HNRNPA1-202ENST00000340913 1842 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 TLL1-206ENST00000513213 1829 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 HNRNPR-212ENST00000606561 1837 ntTSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 F8-201ENST00000330287 2620 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 USP43-201ENST00000285199 4169 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 SHANK1-204ENST00000391814 6622 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 TMEM184A-201ENST00000297477 6276 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 UBXN1-201ENST00000294119 1291 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 CAP1-205ENST00000372802 2964 ntAPPRIS ALT1 TSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 MXI1-205ENST00000393134 889 ntTSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 POM121L8P-201ENST00000417732 1281 ntBASIC15.06■□□□□ 0
HMGCLP35914 AC018467.1-201ENST00000421581 717 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 POM121L9P-203ENST00000441984 1285 ntBASIC15.06■□□□□ 0
HMGCLP35914 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 FTH1P14-201ENST00000482930 551 ntBASIC15.06■□□□□ 0
HMGCLP35914 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 MRPL52-211ENST00000555536 451 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 RPL28-206ENST00000558752 671 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 ARID1B-222ENST00000637003 1290 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 RER1-203ENST00000378513 3000 ntTSL 3 BASIC15.06■□□□□ 0
HMGCLP35914 ICAM2-201ENST00000412356 1334 ntAPPRIS P1 TSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 LSS-202ENST00000397728 4936 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 EID1-201ENST00000530028 2298 ntAPPRIS P1 BASIC15.06■□□□□ 0
HMGCLP35914 CYP51A1-201ENST00000003100 3210 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 MED15-202ENST00000292733 3252 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 PPP1R1B-205ENST00000579000 1466 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 PRLHR-201ENST00000239032 5446 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 DIDO1-207ENST00000395343 8477 ntAPPRIS ALT2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 BICD2-202ENST00000375512 4636 ntAPPRIS P3 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 DDX55-201ENST00000238146 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 ABCB8-212ENST00000477719 1625 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC15.06■□□□□ 0
HMGCLP35914 CLUH-202ENST00000570628 5244 ntAPPRIS P2 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 SRPX-206ENST00000544439 1842 ntAPPRIS ALT2 TSL 2 BASIC15.06■□□□□ 0
HMGCLP35914 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC15.06■□□□□ 0
HMGCLP35914 CSGALNACT1-211ENST00000522854 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 MEGF10-202ENST00000418761 2238 ntTSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 HEY1-202ENST00000354724 2293 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 ZNF586-201ENST00000391702 2265 ntTSL 2 BASIC15.05■□□□□ 0
HMGCLP35914 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 CICP14-201ENST00000629111 2732 ntBASIC15.05■□□□□ 0
HMGCLP35914 MFSD13A-201ENST00000238936 2852 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HMGCLP35914 MAPKAPK3-203ENST00000446044 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ 0
HMGCLP35914 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC15.05■□□□□ 0
HMGCLP35914 PLAGL1-206ENST00000416623 3237 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC15.05■□□□□ -0
HMGCLP35914 PDE6D-201ENST00000287600 1175 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 ZBTB12BP-201ENST00000314232 1122 ntBASIC15.05■□□□□ -0
HMGCLP35914 LBX2-201ENST00000341396 886 ntTSL 3 BASIC15.05■□□□□ -0
HMGCLP35914 VCX3B-202ENST00000381032 1171 ntAPPRIS P2 TSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 CPLX2-202ENST00000393745 826 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 TMEM107-204ENST00000437139 747 ntAPPRIS ALT1 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 AL807752.4-201ENST00000439076 580 ntTSL 2 BASIC15.05■□□□□ -0
HMGCLP35914 AC072022.1-201ENST00000450760 1144 ntAPPRIS P1 TSL 3 BASIC15.05■□□□□ -0
HMGCLP35914 FO681548.1-201ENST00000455617 1132 ntBASIC15.05■□□□□ -0
HMGCLP35914 AC007551.1-201ENST00000457394 519 ntBASIC15.05■□□□□ -0
HMGCLP35914 NAA50-208ENST00000497255 789 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 DRAP1-208ENST00000532933 751 ntTSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC15.05■□□□□ -0
HMGCLP35914 AC004466.1-201ENST00000599515 1080 ntBASIC15.05■□□□□ -0
HMGCLP35914 SPATA21-206ENST00000612240 603 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 IFNL3-202ENST00000613087 734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.05■□□□□ -0
HMGCLP35914 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.05■□□□□ -0
HMGCLP35914 ETV2-208ENST00000621247 941 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 PFAS-212ENST00000625942 396 ntTSL 5 BASIC15.05■□□□□ -0
HMGCLP35914 CHI3L2-212ENST00000524472 1435 ntTSL 2 BASIC15.05■□□□□ -0
Retrieved 100 of 98,524 protein–RNA pairs in 35.2 ms