Protein–RNA interactions for Protein: P35790

CHKA, Choline kinase alpha, humanhuman

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKAP35790 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 FLT3LG-205ENST00000596435 1034 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 METTL26-214ENST00000614890 801 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 MIR6805-201ENST00000615055 62 ntBASIC16.04■□□□□ 0.16
CHKAP35790 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 AC004834.1-204ENST00000640670 1055 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 ANKRD50-202ENST00000515641 4212 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 FOXRED2-204ENST00000397224 4967 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 HTR3E-202ENST00000415389 2139 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 PPM1B-205ENST00000409432 3025 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC16.04■□□□□ 0.16
CHKAP35790 DMTN-205ENST00000432128 2508 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 GNE-202ENST00000396594 5298 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 ARHGEF6-202ENST00000370620 4764 ntTSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 NETO2-202ENST00000562435 7481 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 PITPNB-202ENST00000335272 2926 ntAPPRIS P3 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 SPATA21-201ENST00000335496 2015 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 C3orf62-201ENST00000343010 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 BCS1L-203ENST00000392110 1525 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
CHKAP35790 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC16.04■□□□□ 0.16
CHKAP35790 SLC44A2-201ENST00000335757 3671 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
CHKAP35790 TP53INP2-201ENST00000374809 4018 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 AGER-206ENST00000375070 1463 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 AGER-208ENST00000438221 1493 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 FOXJ2-201ENST00000162391 5523 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 GPR137C-201ENST00000321662 3888 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 WSCD1-210ENST00000574946 5884 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 TJP3-202ENST00000541714 3350 ntAPPRIS P3 TSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 FAM172A-204ENST00000505869 1387 ntTSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 AC006504.5-203ENST00000590628 1335 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 ECE1-204ENST00000415912 5099 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 COX6B2-201ENST00000326529 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 NFU1-201ENST00000303698 1034 ntAPPRIS ALT2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 BEX3-203ENST00000372635 805 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 AC005229.1-201ENST00000392885 409 ntBASIC16.03■□□□□ 0.16
CHKAP35790 NDUFC1-203ENST00000394228 761 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 PGF-202ENST00000405431 666 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 AC068587.3-201ENST00000526613 355 ntBASIC16.03■□□□□ 0.16
CHKAP35790 APRT-204ENST00000563655 709 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 ORC6-206ENST00000568364 888 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 SMCO4-206ENST00000596676 180 ntAPPRIS P1 BASIC16.03■□□□□ 0.16
CHKAP35790 AL512343.1-201ENST00000605837 169 ntBASIC16.03■□□□□ 0.16
CHKAP35790 AC107373.2-201ENST00000607735 490 ntBASIC16.03■□□□□ 0.16
CHKAP35790 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 CHIA-201ENST00000343320 1624 ntAPPRIS P1 TSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 TMEM169-204ENST00000437356 1634 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 CCDC116-201ENST00000292779 2260 ntAPPRIS P2 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 CD19-201ENST00000324662 1932 ntAPPRIS P3 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 OPCML-IT1-201ENST00000533859 2936 ntTSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 ST3GAL3-208ENST00000361392 2243 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 STOML1-204ENST00000541638 6336 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 AC117489.1-201ENST00000625169 3217 ntBASIC16.03■□□□□ 0.16
CHKAP35790 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 NAA60-229ENST00000575076 2531 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 NSUN5P1-206ENST00000457988 1836 ntTSL 2 BASIC16.03■□□□□ 0.16
CHKAP35790 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 BCKDHA-201ENST00000269980 2103 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 MLF1-216ENST00000618075 2116 ntTSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 TMCC2-202ENST00000330675 2780 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
CHKAP35790 ARHGAP4-202ENST00000370016 3095 ntAPPRIS ALT2 TSL 5 BASIC16.03■□□□□ 0.16
CHKAP35790 CD2BP2-203ENST00000569466 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 NRIP1-203ENST00000400202 7671 ntAPPRIS P1 TSL 5 BASIC16.02■□□□□ 0.16
CHKAP35790 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC16.02■□□□□ 0.16
CHKAP35790 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC16.02■□□□□ 0.16
CHKAP35790 MFSD4B-201ENST00000368847 5958 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 AC018665.1-201ENST00000622927 1362 ntBASIC16.02■□□□□ 0.16
CHKAP35790 ACE3P-201ENST00000423435 1973 ntBASIC16.02■□□□□ 0.16
CHKAP35790 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 CAPN7-201ENST00000253693 4353 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 HTR7-202ENST00000336152 3126 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 DUS4L-201ENST00000265720 2220 ntAPPRIS P1 TSL 2 BASIC16.02■□□□□ 0.16
CHKAP35790 PRMT2-202ENST00000334494 1334 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 TARSL2-201ENST00000335968 3610 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC16.02■□□□□ 0.16
CHKAP35790 BRF1-202ENST00000379932 884 ntTSL 5 BASIC16.02■□□□□ 0.16
CHKAP35790 BAATP1-201ENST00000412284 1225 ntBASIC16.02■□□□□ 0.16
CHKAP35790 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC16.02■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 62.6 ms