Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 NOP14-201ENST00000314262 2889 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 MAPKAP1-206ENST00000373511 3252 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
HOXC12P31275 TMPO-AS1-202ENST00000548760 3357 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 PLAC9-201ENST00000372263 785 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 GZMB-202ENST00000382540 816 ntTSL 5 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC007952.1-202ENST00000399083 1173 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 GOLGA2P4-201ENST00000441462 777 ntBASIC13.52□□□□□ -0.25
HOXC12P31275 AC113608.2-201ENST00000448379 487 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC078785.1-203ENST00000467342 573 ntTSL 4 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC099548.2-209ENST00000480264 625 ntBASIC13.52□□□□□ -0.25
HOXC12P31275 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC005833.2-201ENST00000527518 1249 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 AP001063.1-201ENST00000568332 529 ntBASIC13.52□□□□□ -0.25
HOXC12P31275 MIR5189-201ENST00000577370 114 ntBASIC13.52□□□□□ -0.25
HOXC12P31275 AC003070.2-201ENST00000589730 386 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 CKMT1A-208ENST00000626814 1073 ntTSL 5 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 ACP5-202ENST00000412435 1527 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 ZC2HC1C-202ENST00000439583 1509 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 ZSCAN32-205ENST00000439568 1746 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 PCCB-204ENST00000462637 1715 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
HOXC12P31275 CTSD-207ENST00000636571 1790 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
HOXC12P31275 TRMT10C-201ENST00000309922 1819 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 TSSK2-201ENST00000399635 1816 ntAPPRIS P1 BASIC13.52□□□□□ -0.25
HOXC12P31275 AC105250.1-201ENST00000509378 2057 ntBASIC13.52□□□□□ -0.25
HOXC12P31275 MFF-204ENST00000353339 2186 ntTSL 5 BASIC13.52□□□□□ -0.25
HOXC12P31275 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 PUS1-208ENST00000542167 2151 ntTSL 5 BASIC13.52□□□□□ -0.25
HOXC12P31275 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 HNRNPF-204ENST00000443950 2755 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 LONRF3-203ENST00000422289 2898 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 REPIN1-202ENST00000425389 2876 ntAPPRIS P3 BASIC13.52□□□□□ -0.25
HOXC12P31275 ZNF786-202ENST00000491431 2874 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 FGF11-201ENST00000293829 3063 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 SURF4-209ENST00000618229 3200 ntTSL 2 BASIC13.52□□□□□ -0.25
HOXC12P31275 MAP2K7-201ENST00000397979 3361 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 TNNI1-207ENST00000622580 6142 ntAPPRIS ALT1 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 TRIM56-201ENST00000306085 10952 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
HOXC12P31275 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HOXC12P31275 AXL-201ENST00000301178 4737 ntAPPRIS P4 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 BMP1-203ENST00000354870 3989 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 MTHFD1L-203ENST00000367321 3604 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 KIFC3-206ENST00000541240 3047 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 RAD51-201ENST00000267868 2449 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 NACC2-202ENST00000371753 6802 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 DUSP6-202ENST00000308385 1959 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 ARHGEF5-201ENST00000056217 5544 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 BPGM-201ENST00000344924 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 HNRNPR-204ENST00000427764 1788 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 KAT7-210ENST00000509773 1774 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 WRAP53-210ENST00000534050 1736 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 ECHDC2-203ENST00000371522 1509 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 CENPO-202ENST00000380834 4386 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 RBM8A-201ENST00000369307 796 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 IGHV3-16-201ENST00000390604 425 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
HOXC12P31275 ELK2AP-201ENST00000392510 1007 ntBASIC13.51□□□□□ -0.25
HOXC12P31275 USB1-202ENST00000423271 1217 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 NUS1P3-201ENST00000423502 862 ntBASIC13.51□□□□□ -0.25
HOXC12P31275 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 AL133481.1-201ENST00000438554 511 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 RPL7P3-201ENST00000441388 714 ntBASIC13.51□□□□□ -0.25
HOXC12P31275 POLR2F-208ENST00000470701 584 ntTSL 3 BASIC13.51□□□□□ -0.25
HOXC12P31275 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.51□□□□□ -0.25
HOXC12P31275 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.51□□□□□ -0.25
HOXC12P31275 PLEKHB1-206ENST00000535129 1049 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 AP001453.3-201ENST00000545800 853 ntTSL 3 BASIC13.51□□□□□ -0.25
HOXC12P31275 SDR39U1-212ENST00000555365 976 ntTSL 3 BASIC13.51□□□□□ -0.25
HOXC12P31275 AC129510.1-201ENST00000579979 555 ntTSL 3 BASIC13.51□□□□□ -0.25
HOXC12P31275 AC011489.1-202ENST00000586556 618 ntTSL 2 BASIC13.51□□□□□ -0.25
HOXC12P31275 AC244517.4-201ENST00000624549 580 ntTSL 4 BASIC13.51□□□□□ -0.25
HOXC12P31275 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 FBXO3-203ENST00000526785 5798 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 STRC-205ENST00000450892 5680 ntAPPRIS P2 TSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 MAP4K1-208ENST00000589130 2654 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 IKZF1-202ENST00000343574 5925 ntTSL 5 BASIC13.51□□□□□ -0.25
HOXC12P31275 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
HOXC12P31275 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 45.5 ms