Protein–RNA interactions for Protein: P27539

GDF1, Embryonic growth/differentiation factor 1, humanhuman

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GDF1P27539 FRS2-206ENST00000549921 1952 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 PRMT2-207ENST00000440086 1932 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 TLE4-204ENST00000376537 2793 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 RNF183-201ENST00000297894 1830 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
GDF1P27539 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 STAT1-202ENST00000392322 2716 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
GDF1P27539 MEGF11-203ENST00000409699 6163 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
GDF1P27539 ARHGEF1-219ENST00000599846 3393 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 AC105917.1-201ENST00000506637 2539 ntBASIC13.75□□□□□ -0.21
GDF1P27539 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 SPG21-203ENST00000433215 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 REXO1L6P-201ENST00000603433 1515 ntBASIC13.75□□□□□ -0.21
GDF1P27539 TEX28-203ENST00000617225 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 SLC9A7P1-202ENST00000556476 2239 ntBASIC13.75□□□□□ -0.21
GDF1P27539 SLC38A10-202ENST00000374759 4300 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 ESRRB-207ENST00000556177 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 C12orf49-201ENST00000261318 8404 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 MBD4-204ENST00000503197 2099 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 PRG2-202ENST00000525955 1367 ntAPPRIS P3 TSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 CHRNA7-217ENST00000636603 2012 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 SLC9A7P1-201ENST00000554295 3311 ntBASIC13.75□□□□□ -0.21
GDF1P27539 CCDC90B-213ENST00000529611 1986 ntTSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 TPO-206ENST00000382269 1155 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 IGHV3-53-201ENST00000390627 571 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
GDF1P27539 CD8B2-202ENST00000417670 633 ntBASIC13.75□□□□□ -0.21
GDF1P27539 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC13.75□□□□□ -0.21
GDF1P27539 AL355994.2-201ENST00000447882 704 ntBASIC13.75□□□□□ -0.21
GDF1P27539 KLC4-205ENST00000458460 1251 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 AC078785.1-201ENST00000496389 734 ntTSL 3 BASIC13.75□□□□□ -0.21
GDF1P27539 AL583810.1-201ENST00000553344 1045 ntBASIC13.75□□□□□ -0.21
GDF1P27539 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC13.75□□□□□ -0.21
GDF1P27539 DYNLRB2-205ENST00000568035 409 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 RN7SL219P-201ENST00000582872 296 ntBASIC13.75□□□□□ -0.21
GDF1P27539 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 TECR-220ENST00000600083 1204 ntTSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 MYCBPAP-201ENST00000323776 3186 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 ELMO3-201ENST00000360833 2480 ntAPPRIS ALT2 TSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 PGR-210ENST00000619228 3038 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 MASTL-203ENST00000375946 3623 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 FAM84B-201ENST00000304916 5404 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 SLC26A10-201ENST00000320442 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 ALDOA-201ENST00000338110 2384 ntAPPRIS P2 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 LIPE-AS1-205ENST00000594688 2383 ntTSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 GLIDR-204ENST00000638724 1765 ntTSL 5 BASIC13.75□□□□□ -0.21
GDF1P27539 JARID2-201ENST00000341776 5755 ntAPPRIS P3 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 KHNYN-201ENST00000251343 6725 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 GJB6-202ENST00000356192 2131 ntAPPRIS P1 TSL 2 BASIC13.75□□□□□ -0.21
GDF1P27539 STT3B-201ENST00000295770 4248 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 GRAMD1C-201ENST00000358160 4177 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
GDF1P27539 RBFOX1-205ENST00000436368 1530 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 SHISA9-201ENST00000423335 4043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 SURF4-202ENST00000371989 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 HGNC:24955-201ENST00000303177 2452 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 RALGPS1-203ENST00000373434 2466 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 SLC35C2-213ENST00000543605 5740 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 THAP10-201ENST00000249861 2399 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 ADCYAP1-203ENST00000579794 3346 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 IFNAR1-201ENST00000270139 6139 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 PAK1-210ENST00000528203 1878 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 AL137783.1-201ENST00000623494 1896 ntBASIC13.74□□□□□ -0.21
GDF1P27539 PIGW-204ENST00000614443 2312 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 EEPD1-205ENST00000534978 2769 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 AL365209.1-201ENST00000624418 6473 ntBASIC13.74□□□□□ -0.21
GDF1P27539 AL162727.3-201ENST00000635661 2787 ntBASIC13.74□□□□□ -0.21
GDF1P27539 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 ZNF821-203ENST00000446827 1822 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 WIZ-206ENST00000599686 3644 ntTSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 HSD17B6-205ENST00000554643 1751 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 STXBP5-207ENST00000546097 2160 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 HSPA4L-204ENST00000508776 3020 ntAPPRIS P1 TSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 TSPAN11-201ENST00000261177 5505 ntAPPRIS P1 TSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC13.74□□□□□ -0.21
GDF1P27539 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC13.74□□□□□ -0.21
GDF1P27539 RHOG-203ENST00000396979 1289 ntAPPRIS P1 TSL 3 BASIC13.74□□□□□ -0.21
GDF1P27539 AC092614.1-201ENST00000419640 909 ntTSL 3 BASIC13.74□□□□□ -0.21
GDF1P27539 FAM8A4P-201ENST00000435433 1213 ntBASIC13.74□□□□□ -0.21
GDF1P27539 AP001790.1-201ENST00000511947 570 ntTSL 4 BASIC13.74□□□□□ -0.21
GDF1P27539 CHCHD7-211ENST00000521831 573 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC13.74□□□□□ -0.21
GDF1P27539 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
GDF1P27539 RHOG-204ENST00000533217 886 ntAPPRIS P1 TSL 5 BASIC13.74□□□□□ -0.21
GDF1P27539 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC13.74□□□□□ -0.21
GDF1P27539 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC13.74□□□□□ -0.21
GDF1P27539 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC13.74□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 54.5 ms