Protein–RNA interactions for Protein: P22670

RFX1, MHC class II regulatory factor RFX1, humanhuman

Predictions only

Length 979 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1P22670 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
RFX1P22670 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC16.55■□□□□ 0.24
RFX1P22670 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 ZSWIM8-AS1-201ENST00000456638 1460 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 RNF167-214ENST00000576229 1436 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 PMP22-201ENST00000312280 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 ACBD5-202ENST00000375897 4173 ntAPPRIS ALT2 TSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 KIF1BP-214ENST00000638119 2537 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 DMAP1-203ENST00000372289 1730 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 GUCD1-206ENST00000435822 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 FGF6-201ENST00000228837 743 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 NAGK-201ENST00000244204 1154 ntAPPRIS P5 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 MGST3-203ENST00000367885 680 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC16.54■□□□□ 0.24
RFX1P22670 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 IFI27L1-201ENST00000393115 674 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 SSR1P1-201ENST00000407630 814 ntBASIC16.54■□□□□ 0.24
RFX1P22670 AF274855.1-203ENST00000424126 800 ntTSL 3 BASIC16.54■□□□□ 0.24
RFX1P22670 ABHD11-AS1-201ENST00000427153 662 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 H2AFV-206ENST00000437072 589 ntTSL 4 BASIC16.54■□□□□ 0.24
RFX1P22670 AL162726.2-201ENST00000438986 1017 ntBASIC16.54■□□□□ 0.24
RFX1P22670 PFN1P12-201ENST00000455938 534 ntBASIC16.54■□□□□ 0.24
RFX1P22670 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC16.54■□□□□ 0.24
RFX1P22670 AC097717.1-202ENST00000457577 740 ntTSL 3 BASIC16.54■□□□□ 0.24
RFX1P22670 AC147067.1-201ENST00000466692 579 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 GCHFR-206ENST00000561160 572 ntTSL 3 BASIC16.54■□□□□ 0.24
RFX1P22670 RARRES2P5-201ENST00000564013 466 ntBASIC16.54■□□□□ 0.24
RFX1P22670 C19orf70-204ENST00000587950 655 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 GPX4-206ENST00000588919 803 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 ZSCAN30-208ENST00000592278 731 ntTSL 4 BASIC16.54■□□□□ 0.24
RFX1P22670 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.54■□□□□ 0.24
RFX1P22670 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 TECR-220ENST00000600083 1204 ntTSL 2 BASIC16.54■□□□□ 0.24
RFX1P22670 AC244093.1-201ENST00000610837 814 ntBASIC16.54■□□□□ 0.24
RFX1P22670 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 MIR6869-201ENST00000619434 62 ntBASIC16.54■□□□□ 0.24
RFX1P22670 Metazoa_SRP.80-201ENST00000619894 320 ntBASIC16.54■□□□□ 0.24
RFX1P22670 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC16.54■□□□□ 0.24
RFX1P22670 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 AC126755.1-201ENST00000525846 6405 ntBASIC16.54■□□□□ 0.24
RFX1P22670 RBFOX3-211ENST00000583458 2934 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 PPFIBP2-201ENST00000299492 3557 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 PDIA3P1-201ENST00000471856 1510 ntBASIC16.54■□□□□ 0.24
RFX1P22670 PITPNM1-202ENST00000436757 4216 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 MUC1-228ENST00000620103 1811 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 ANOS1-201ENST00000262648 6314 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
RFX1P22670 PPP3CB-201ENST00000342558 2418 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 ADCYAP1R1-204ENST00000409489 1761 ntTSL 5 BASIC16.54■□□□□ 0.24
RFX1P22670 FAM198B-203ENST00000585682 4900 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 REPIN1-201ENST00000397281 3292 ntAPPRIS P3 TSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 NOX3-201ENST00000159060 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 GRN-201ENST00000053867 2342 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 AC020907.1-201ENST00000616460 1350 ntBASIC16.53■□□□□ 0.24
RFX1P22670 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 GRB7-203ENST00000394209 1955 ntAPPRIS P1 TSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 IL12RB2-201ENST00000262345 4040 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 UPB1-202ENST00000382760 1928 ntTSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 SCNN1D-205ENST00000379116 3044 ntAPPRIS P2 TSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 ATP6V1C2-201ENST00000272238 1565 ntTSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 PLA2G5-201ENST00000375108 1161 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 ROPN1-202ENST00000405845 1007 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 AL353747.3-201ENST00000454185 579 ntTSL 3 BASIC16.53■□□□□ 0.24
RFX1P22670 OSGIN2-203ENST00000520659 801 ntTSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 AC011603.1-201ENST00000553174 717 ntTSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 BX927359.1-201ENST00000556073 543 ntTSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC16.53■□□□□ 0.24
RFX1P22670 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC16.53■□□□□ 0.24
RFX1P22670 PAM16-204ENST00000571941 674 ntTSL 3 BASIC16.53■□□□□ 0.24
RFX1P22670 FRMD5-209ENST00000484674 2319 ntTSL 2 BASIC16.53■□□□□ 0.24
RFX1P22670 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 NFYC-205ENST00000372654 1455 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 BICDL1-201ENST00000397558 3055 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
RFX1P22670 STAT5A-211ENST00000590949 3318 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
RFX1P22670 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 39.7 ms