Protein–RNA interactions for Protein: P0DP25

CALM3, Calmodulin-3, humanhuman

Predictions only

Length 149 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALM3P0DP25 AP000345.1-201ENST00000454863 569 ntTSL 4 BASIC17.58■□□□□ 0.4
CALM3P0DP25 NPHP3-AS1-201ENST00000489343 2957 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 GNLY-210ENST00000524600 750 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
CALM3P0DP25 AC005865.1-202ENST00000543036 641 ntTSL 2 BASIC17.58■□□□□ 0.4
CALM3P0DP25 KRT90P-201ENST00000549264 1064 ntBASIC17.58■□□□□ 0.4
CALM3P0DP25 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC17.58■□□□□ 0.4
CALM3P0DP25 RAB43P1-201ENST00000561790 589 ntBASIC17.58■□□□□ 0.4
CALM3P0DP25 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 TMEM263-201ENST00000280756 3362 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 THRA-203ENST00000450525 4895 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 PRSS54-201ENST00000219301 1810 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CALM3P0DP25 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 RNF182-206ENST00000537388 3274 ntAPPRIS P1 TSL 2 BASIC17.58■□□□□ 0.4
CALM3P0DP25 PPP1R26-204ENST00000604351 4640 ntAPPRIS P1 TSL 3 BASIC17.58■□□□□ 0.4
CALM3P0DP25 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CALM3P0DP25 PTPRU-201ENST00000345512 4470 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 GNB4-201ENST00000232564 6434 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 IL6ST-209ENST00000502326 3007 ntAPPRIS P1 TSL 5 BASIC17.58■□□□□ 0.4
CALM3P0DP25 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
CALM3P0DP25 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 F2-201ENST00000311907 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 HS1BP3-203ENST00000406618 1375 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
CALM3P0DP25 ADORA1-204ENST00000367236 3407 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 ELMOD1-201ENST00000265840 2852 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 GAL-201ENST00000265643 818 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 SERF2-209ENST00000409646 559 ntTSL 4 BASIC17.57■□□□□ 0.4
CALM3P0DP25 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 ADAMTSL1-210ENST00000431052 824 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 MESTP3-201ENST00000503460 968 ntBASIC17.57■□□□□ 0.4
CALM3P0DP25 AAMDC-206ENST00000526415 579 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 AP001995.1-201ENST00000531784 1157 ntTSL 4 BASIC17.57■□□□□ 0.4
CALM3P0DP25 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC17.57■□□□□ 0.4
CALM3P0DP25 GLIS2-AS1-201ENST00000576080 340 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 AC005597.1-201ENST00000588092 420 ntTSL 3 BASIC17.57■□□□□ 0.4
CALM3P0DP25 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 TNRC18P2-201ENST00000417666 2714 ntBASIC17.57■□□□□ 0.4
CALM3P0DP25 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 PCDHA3-202ENST00000532566 4594 ntBASIC17.57■□□□□ 0.4
CALM3P0DP25 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
CALM3P0DP25 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 HCRTR1-202ENST00000373706 1642 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 YIPF3-202ENST00000372422 1576 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 MLLT3-210ENST00000630269 2040 ntAPPRIS ALT1 TSL 2 BASIC17.57■□□□□ 0.4
CALM3P0DP25 CHAF1A-201ENST00000301280 3339 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 MAP2K6-209ENST00000613873 1509 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
CALM3P0DP25 DNAJC19-201ENST00000382564 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 CNOT8-204ENST00000517876 2708 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CALM3P0DP25 TRA2A-202ENST00000392502 2229 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
CALM3P0DP25 PAK4-205ENST00000593690 3025 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 DDHD2-201ENST00000397166 4921 ntAPPRIS P1 TSL 2 BASIC17.56■□□□□ 0.4
CALM3P0DP25 HNRNPDL-208ENST00000621267 4139 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 MARK4-202ENST00000300843 5209 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 FGD5P1-202ENST00000614866 2498 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 PI4K2B-201ENST00000264864 3540 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 CLCN6-207ENST00000376497 814 ntTSL 3 BASIC17.56■□□□□ 0.4
CALM3P0DP25 GZMB-202ENST00000382540 816 ntTSL 5 BASIC17.56■□□□□ 0.4
CALM3P0DP25 AC112492.5-201ENST00000421897 457 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 KIF9-205ENST00000432493 633 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 AL157834.2-201ENST00000451737 663 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 GPR53P-205ENST00000457298 1084 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CALM3P0DP25 RPL8-205ENST00000527914 551 ntTSL 3 BASIC17.56■□□□□ 0.4
CALM3P0DP25 AP000812.2-201ENST00000538934 718 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 ANAPC15-214ENST00000543587 883 ntAPPRIS ALT1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC17.56■□□□□ 0.4
CALM3P0DP25 AC004466.1-201ENST00000599515 1080 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 AC244669.2-201ENST00000612320 853 ntBASIC17.56■□□□□ 0.4
CALM3P0DP25 ADAM15-205ENST00000360674 2732 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC17.56■□□□□ 0.4
CALM3P0DP25 RFK-201ENST00000376736 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
CALM3P0DP25 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
CALM3P0DP25 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 32.1 ms