Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 C20orf203-202ENST00000608990 5076 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 CHD4-201ENST00000357008 6496 ntAPPRIS P3 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 FAM160A2-203ENST00000524416 3327 ntTSL 2 BASIC15.03■□□□□ -0
CAPN1P07384 ZBTB14-202ENST00000400143 1814 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 PSD2-201ENST00000274710 4513 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 RPTOR-202ENST00000544334 5734 ntTSL 5 BASIC15.03■□□□□ -0
CAPN1P07384 ANK1-201ENST00000265709 6379 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 ZNF789-201ENST00000331410 1654 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 MAGEA2-202ENST00000598543 1662 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 RNF135-202ENST00000328381 2892 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
CAPN1P07384 MBD1-209ENST00000398495 2178 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 KCNJ18-201ENST00000567955 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 SEC24D-202ENST00000419654 2786 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 LILRP2-201ENST00000413439 2127 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 EEF1A1-202ENST00000316292 4441 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 PKN2-201ENST00000316005 2632 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 PHAX-201ENST00000297540 4288 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 ACTL9-201ENST00000324436 1426 ntAPPRIS P1 BASIC15.02■□□□□ -0
CAPN1P07384 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 KCNJ5-203ENST00000533599 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 CNTFR-204ENST00000610543 1926 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 AC007326.5-201ENST00000640084 1382 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 PRPS2-203ENST00000398491 1348 ntAPPRIS ALT1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 URAHP-202ENST00000409873 1349 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 AC007292.2-201ENST00000593524 1812 ntBASIC15.02■□□□□ -0
CAPN1P07384 DIAPH2-204ENST00000373054 3376 ntAPPRIS ALT2 TSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 RASGRF2-206ENST00000638442 2842 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 NXT2-202ENST00000372103 1085 ntTSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 SDHB-201ENST00000375499 1153 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
CAPN1P07384 AL133267.1-201ENST00000398220 340 ntBASIC15.02■□□□□ -0
CAPN1P07384 GHSR-202ENST00000427970 912 ntBASIC15.02■□□□□ -0
CAPN1P07384 RPL13P2-201ENST00000440687 659 ntBASIC15.02■□□□□ -0
CAPN1P07384 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC15.02■□□□□ -0
CAPN1P07384 GIMAP3P-201ENST00000495150 836 ntBASIC15.02■□□□□ -0
CAPN1P07384 FADS2-205ENST00000517839 469 ntTSL 3 BASIC15.02■□□□□ -0
CAPN1P07384 NOP2-220ENST00000545915 630 ntTSL 2 BASIC15.02■□□□□ -0
CAPN1P07384 AC016727.1-204ENST00000578974 420 ntTSL 3 BASIC15.02■□□□□ -0
CAPN1P07384 UBL5-208ENST00000593087 320 ntTSL 3 BASIC15.02■□□□□ -0
CAPN1P07384 LINC01115-203ENST00000606068 577 ntBASIC15.02■□□□□ -0
CAPN1P07384 AL391069.4-201ENST00000609583 481 ntBASIC15.02■□□□□ -0
CAPN1P07384 PCSK6-221ENST00000632686 1210 ntTSL 5 BASIC15.02■□□□□ -0
CAPN1P07384 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 GDAP1L1-201ENST00000342560 2265 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 TMEM201-202ENST00000340381 3776 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
CAPN1P07384 ARHGEF16-201ENST00000378371 2219 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 ST3GAL3-209ENST00000361400 2195 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC15.02□□□□□ -0.01
CAPN1P07384 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC15.02□□□□□ -0.01
CAPN1P07384 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC15.02□□□□□ -0.01
CAPN1P07384 MYADML2-201ENST00000409745 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 CNDP2-201ENST00000324262 5130 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 ACE3P-201ENST00000423435 1973 ntBASIC15.02□□□□□ -0.01
CAPN1P07384 PCDHGB8P-201ENST00000502926 1973 ntBASIC15.02□□□□□ -0.01
CAPN1P07384 NPHP4-201ENST00000378156 4994 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 STEAP2-202ENST00000394621 7033 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
CAPN1P07384 SPIRE1-201ENST00000309836 1877 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN1P07384 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 SYBU-208ENST00000440310 3072 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 RASSF5-201ENST00000577571 3496 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 CAMK2D-211ENST00000511664 2210 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN1P07384 RCOR2-201ENST00000301459 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 ZNF800-201ENST00000265827 4203 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 FAM149A-202ENST00000356371 2997 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 DMTN-201ENST00000265800 2554 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 DMTN-207ENST00000517305 2551 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 PRKRIP1-201ENST00000397912 2159 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 HMOX2-205ENST00000458134 1797 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 ZNF384-202ENST00000355772 2514 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 AP000845.1-201ENST00000581677 2131 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 AC026688.2-201ENST00000518984 1734 ntTSL 3 BASIC15.01□□□□□ -0.01
CAPN1P07384 DTX4-204ENST00000532982 1708 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 DPP9-210ENST00000597849 2025 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 E2F6-211ENST00000542100 3450 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 SCAND1-201ENST00000305978 902 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 BANF1-201ENST00000312175 1155 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 AKIP1-204ENST00000396648 1084 ntAPPRIS ALT2 TSL 2 BASIC15.01□□□□□ -0.01
CAPN1P07384 PGF-202ENST00000405431 666 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 AL512384.1-201ENST00000406683 331 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 RCHY1-210ENST00000513257 759 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 AC025442.1-201ENST00000521596 481 ntTSL 2 BASIC15.01□□□□□ -0.01
CAPN1P07384 TIMM17BP1-201ENST00000545713 516 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 RARRES2P5-201ENST00000564013 466 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 RRP7BP-205ENST00000566851 833 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.01□□□□□ -0.01
CAPN1P07384 AC010327.1-201ENST00000587871 975 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
CAPN1P07384 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 AC093726.1-201ENST00000608064 963 ntBASIC15.01□□□□□ -0.01
CAPN1P07384 TAF6-201ENST00000344095 2727 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
CAPN1P07384 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC15.01□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 57 ms