Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AC007686.3-201ENST00000619017 3487 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 BCL11A-203ENST00000358510 2697 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ZNF485-201ENST00000361807 2054 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SLC16A3-211ENST00000581287 4830 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 MAPKAP1-201ENST00000265960 3395 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SLC7A4-201ENST00000382932 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 UEVLD-201ENST00000300038 995 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 NDUFB8-202ENST00000370320 684 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 TPM1-207ENST00000403994 1049 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AC021188.1-201ENST00000421534 740 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 RPL28-203ENST00000428193 573 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 RPL28-204ENST00000431533 590 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 TTTY23B-201ENST00000442790 549 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AC128709.1-201ENST00000445908 600 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 USP32P1-208ENST00000506594 1164 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 LINC01595-201ENST00000555406 639 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 RPL28-207ENST00000558815 616 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 PIGL-212ENST00000581006 554 ntTSL 4 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AC008735.3-201ENST00000596646 500 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AC145423.3-201ENST00000615987 467 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 PLTP-201ENST00000354050 1731 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 BTBD11-204ENST00000420571 3478 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 OR2V1-205ENST00000642036 2609 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ALDOA-228ENST00000627059 2402 ntAPPRIS ALT1 TSL 5 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SNRNP27-202ENST00000409116 1339 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SLC1A5-201ENST00000412532 1750 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 CCDC51-204ENST00000442740 1554 ntTSL 3 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ZFYVE28-210ENST00000515169 1590 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AL390755.1-201ENST00000623716 2027 ntBASIC15.36■□□□□ 0.05
HLA-DQB2P05538 NR6A1-205ENST00000487099 7031 ntAPPRIS P3 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 CRYBG2-210ENST00000527815 2523 ntAPPRIS ALT2 TSL 2 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SOWAHA-201ENST00000378693 3211 ntAPPRIS P1 BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 SRD5A2-201ENST00000622030 4648 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
HLA-DQB2P05538 ZFP41-203ENST00000520584 3284 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 EFHC1-212ENST00000635984 3293 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 PA2G4-201ENST00000303305 2577 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SLC22A7-202ENST00000372585 2555 ntAPPRIS P4 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC092384.2-204ENST00000565053 2566 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 LINC02395-201ENST00000546821 3157 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 RAB41-201ENST00000276066 1071 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 RAB41-202ENST00000374473 1074 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 EIF1AX-201ENST00000379593 765 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 GRAP-202ENST00000395635 834 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 CRYAA-202ENST00000398132 826 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AL133456.1-201ENST00000415655 577 ntTSL 4 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 NME2P1-201ENST00000426182 414 ntBASIC15.35■□□□□ 0.05
HLA-DQB2P05538 GSAP-205ENST00000430584 600 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC084864.1-201ENST00000496217 305 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 FUZ-207ENST00000526575 482 ntTSL 4 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 ANAPC11-215ENST00000578550 599 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC138474.1-201ENST00000586630 523 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 TUBB6-213ENST00000591909 1017 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 MARCH2-206ENST00000601283 747 ntTSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC073389.2-202ENST00000607450 441 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC244517.11-204ENST00000624424 760 ntTSL 5 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 FP236240.1-204ENST00000624932 712 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AL603764.1-201ENST00000636452 321 ntBASIC15.35■□□□□ 0.05
HLA-DQB2P05538 MMRN2-201ENST00000372027 4375 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 EIF4G1-206ENST00000392537 5229 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 ZNF644-201ENST00000337393 5763 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 FAM210A-202ENST00000402563 4240 ntAPPRIS P1 TSL 3 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 AGTPBP1-208ENST00000628899 4222 ntTSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 COMT-205ENST00000406520 1339 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SNX2-201ENST00000379516 2128 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 UHRF2-201ENST00000276893 3452 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 SLC17A5-201ENST00000355773 3455 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
HLA-DQB2P05538 NR1H3-211ENST00000441012 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms