Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 AC099850.1-201ENST00000451775 1338 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR3DP05423 BPIFB2-201ENST00000170150 1898 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 PHF19-203ENST00000419155 3525 ntTSL 2 BASIC18.13■□□□□ 0.49
POLR3DP05423 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 AC010931.2-202ENST00000514871 2566 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 SHROOM1-201ENST00000319854 3190 ntAPPRIS P3 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 CROCC-201ENST00000375541 6656 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
POLR3DP05423 ZFAND4-203ENST00000374366 3821 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 REXO1L5P-201ENST00000622260 2098 ntBASIC18.13■□□□□ 0.49
POLR3DP05423 DAGLA-201ENST00000257215 5757 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 MST1L-201ENST00000442552 2185 ntBASIC18.13■□□□□ 0.49
POLR3DP05423 FRMPD4-201ENST00000380682 8465 ntAPPRIS P2 TSL 1 (best) BASIC18.13■□□□□ 0.49
POLR3DP05423 RER1-203ENST00000378513 3000 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR3DP05423 DZIP1-204ENST00000376829 3738 ntAPPRIS P4 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 LAT2-202ENST00000344995 2363 ntAPPRIS P2 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 C11orf80-201ENST00000360962 1807 ntAPPRIS ALT2 TSL 5 BASIC18.12■□□□□ 0.49
POLR3DP05423 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR3DP05423 LINC01565-201ENST00000356020 2697 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC18.12■□□□□ 0.49
POLR3DP05423 NXN-210ENST00000575801 2681 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 VANGL2-201ENST00000368061 5340 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 AC104457.1-201ENST00000401024 814 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 EIF3FP3-201ENST00000434851 1086 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR3DP05423 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 DUX4L45-201ENST00000566406 1057 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 AC120498.3-201ENST00000568884 542 ntTSL 4 BASIC18.12■□□□□ 0.49
POLR3DP05423 MIR4538-201ENST00000581377 78 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 AL354740.1-203ENST00000593917 424 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR3DP05423 AC011510.1-201ENST00000598541 286 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR3DP05423 ENPP7P14-201ENST00000621765 1040 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 PAQR8-202ENST00000442253 4738 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 DUSP22-202ENST00000419235 3098 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 LINC01267-201ENST00000502417 2284 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 PCSK2-205ENST00000536609 2275 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 ZBTB37-203ENST00000367704 2323 ntTSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 GPSM3-207ENST00000375043 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 ZEB1-AS1-208ENST00000607166 2503 ntBASIC18.12■□□□□ 0.49
POLR3DP05423 SMYD3-214ENST00000490107 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 FAM219A-206ENST00000379087 3573 ntAPPRIS ALT1 TSL 4 BASIC18.12■□□□□ 0.49
POLR3DP05423 PAQR6-214ENST00000613336 1599 ntTSL 3 BASIC18.12■□□□□ 0.49
POLR3DP05423 GGACT-202ENST00000455100 2678 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 ZBTB7C-204ENST00000586438 4899 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 GEMIN7-201ENST00000270257 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 TCP11-206ENST00000412155 1690 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
POLR3DP05423 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 ADCY2-201ENST00000338316 6575 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
POLR3DP05423 KITLG-202ENST00000347404 1948 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR3DP05423 ARID4B-202ENST00000349213 5811 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 MARK3-202ENST00000303622 3283 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 TIMP3-201ENST00000266085 4603 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 HYAL2-201ENST00000357750 2055 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 ZFPM2-201ENST00000407775 4700 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 KLF5-201ENST00000377687 3566 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 PSMB6-201ENST00000270586 852 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 SPDYE7P-201ENST00000355920 1064 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR3DP05423 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR3DP05423 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR3DP05423 CENPM-208ENST00000472374 541 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 RPARP-AS1-201ENST00000473970 1297 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR3DP05423 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC18.11■□□□□ 0.49
POLR3DP05423 DIO3OS-203ENST00000554441 1068 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 HNRNPA1P48-202ENST00000565308 961 ntBASIC18.11■□□□□ 0.49
POLR3DP05423 RN7SL560P-201ENST00000577943 264 ntBASIC18.11■□□□□ 0.49
POLR3DP05423 DMAC2-208ENST00000589970 979 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR3DP05423 DMAC2-215ENST00000597457 492 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR3DP05423 PSMB6-205ENST00000614486 871 ntTSL 2 BASIC18.11■□□□□ 0.49
POLR3DP05423 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC18.11■□□□□ 0.49
POLR3DP05423 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 AL354989.2-201ENST00000435838 1540 ntBASIC18.11■□□□□ 0.49
POLR3DP05423 SMPDL3A-201ENST00000368440 1851 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 SCLT1-208ENST00000506368 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 TXNDC2-206ENST00000611534 2066 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
POLR3DP05423 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 PDE8B-202ENST00000333194 2572 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 ENDOV-204ENST00000518137 2815 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
POLR3DP05423 FASTKD5-201ENST00000380266 2874 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
POLR3DP05423 NF2-210ENST00000413209 4733 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 66.2 ms