Protein–RNA interactions for Protein: O60294

LCMT2, tRNA wybutosine-synthesizing protein 4, humanhuman

Known RBP Predictions only

Length 686 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCMT2O60294 AC026434.2-201ENST00000506094 1078 ntBASIC14.52□□□□□ -0.09
LCMT2O60294 AC125603.2-201ENST00000546835 876 ntTSL 3 BASIC14.52□□□□□ -0.09
LCMT2O60294 AP001005.4-201ENST00000572530 387 ntTSL 3 BASIC14.52□□□□□ -0.09
LCMT2O60294 PIGL-212ENST00000581006 554 ntTSL 4 BASIC14.52□□□□□ -0.09
LCMT2O60294 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.52□□□□□ -0.09
LCMT2O60294 MALAT1-211ENST00000617791 394 ntTSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 AL035252.4-201ENST00000624174 288 ntBASIC14.52□□□□□ -0.09
LCMT2O60294 LINC01759-203ENST00000635271 888 ntTSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 COX10-201ENST00000261643 2873 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 JRK-209ENST00000612905 9124 ntAPPRIS P4 TSL 2 BASIC14.52□□□□□ -0.09
LCMT2O60294 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 CICP24-201ENST00000605464 2705 ntBASIC14.52□□□□□ -0.09
LCMT2O60294 ASIC4-201ENST00000347842 2684 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 NAP1L1-202ENST00000393263 1896 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 ATF7-205ENST00000548446 1892 ntAPPRIS ALT1 TSL 2 BASIC14.52□□□□□ -0.09
LCMT2O60294 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 USP37-202ENST00000338465 1771 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 ZMYND10-202ENST00000360165 1757 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 AC055811.4-201ENST00000624039 1754 ntBASIC14.52□□□□□ -0.09
LCMT2O60294 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.52□□□□□ -0.09
LCMT2O60294 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
LCMT2O60294 SF1-209ENST00000433274 2317 ntTSL 2 BASIC14.52□□□□□ -0.09
LCMT2O60294 DHX36-201ENST00000308361 3487 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 SRSF5-203ENST00000553521 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 NUDT16-203ENST00000537561 5943 ntTSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 DLGAP2-215ENST00000637795 3380 ntTSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 CHRDL1-205ENST00000482160 1537 ntTSL 2 BASIC14.51□□□□□ -0.09
LCMT2O60294 PKIG-204ENST00000372889 1489 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 EHF-210ENST00000531794 1481 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 FCHO1-206ENST00000594202 3214 ntTSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 PDRG1-201ENST00000202017 1998 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC14.51□□□□□ -0.09
LCMT2O60294 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 AURKC-203ENST00000448930 1318 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 TPBG-201ENST00000369750 6484 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 THOC7-201ENST00000295899 990 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 IL32-202ENST00000325568 1105 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 MBP-203ENST00000359645 1255 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 S100A16-201ENST00000368703 946 ntAPPRIS P1 TSL 3 BASIC14.51□□□□□ -0.09
LCMT2O60294 IL32-203ENST00000382213 880 ntAPPRIS ALT2 TSL 3 BASIC14.51□□□□□ -0.09
LCMT2O60294 AC092933.1-201ENST00000393644 945 ntBASIC14.51□□□□□ -0.09
LCMT2O60294 AC007319.1-202ENST00000412276 829 ntTSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 ITPR1-AS1-201ENST00000412804 858 ntTSL 2 BASIC14.51□□□□□ -0.09
LCMT2O60294 ELFN1-201ENST00000424383 3845 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.51□□□□□ -0.09
LCMT2O60294 HCST-202ENST00000437550 445 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
LCMT2O60294 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC14.51□□□□□ -0.09
LCMT2O60294 GNRHR2-203ENST00000581100 1187 ntBASIC14.51□□□□□ -0.09
LCMT2O60294 AC233724.13-201ENST00000598383 410 ntBASIC14.51□□□□□ -0.09
LCMT2O60294 AC004466.1-201ENST00000599515 1080 ntBASIC14.51□□□□□ -0.09
LCMT2O60294 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 KCNQ2-204ENST00000359125 3253 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 FKBP5-201ENST00000357266 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 DNAH14-204ENST00000366849 2215 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 RAB29-201ENST00000235932 1723 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 SLC4A2-202ENST00000413384 4142 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 SERPINE2-202ENST00000409304 2161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 ERG28-201ENST00000256319 2633 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 SPN-201ENST00000360121 6894 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 AC023090.2-201ENST00000625182 2110 ntBASIC14.51□□□□□ -0.09
LCMT2O60294 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 TRAPPC11-202ENST00000357207 4435 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 BCL9L-202ENST00000526143 5514 ntTSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 PPP2R1B-203ENST00000393055 1525 ntTSL 2 BASIC14.51□□□□□ -0.09
LCMT2O60294 DDX1-202ENST00000381341 2817 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
LCMT2O60294 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 FXYD6-201ENST00000260282 1929 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
LCMT2O60294 RBM46-204ENST00000514866 2315 ntTSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 NTMT1-204ENST00000372486 1487 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 ZSCAN10-209ENST00000576985 2739 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 HENMT1-202ENST00000370032 1874 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 ELP6-201ENST00000296149 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 TP53I11-208ENST00000525680 2647 ntAPPRIS P1 TSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 DZANK1-202ENST00000329494 1389 ntTSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 AC018665.1-201ENST00000622927 1362 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 GRIK5-204ENST00000593562 3308 ntAPPRIS P1 TSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 AC012313.3-202ENST00000599109 3322 ntTSL 5 BASIC14.5□□□□□ -0.09
LCMT2O60294 RGS3-201ENST00000317613 2542 ntTSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 C19orf57-201ENST00000346736 2489 ntAPPRIS P2 TSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 EVPL-201ENST00000301607 6614 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 AC063926.2-201ENST00000623766 1308 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC14.5□□□□□ -0.09
LCMT2O60294 OTUD6A-201ENST00000338352 1689 ntAPPRIS P1 BASIC14.5□□□□□ -0.09
LCMT2O60294 AL138709.1-201ENST00000614840 1693 ntBASIC14.5□□□□□ -0.09
LCMT2O60294 TBPL2-201ENST00000247219 2037 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
LCMT2O60294 NDUFB7-201ENST00000215565 531 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 68.5 ms