Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 DNM2-203ENST00000389253 3581 ntTSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 GTF2H1-203ENST00000453096 2707 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 OPA1-201ENST00000361150 6330 ntTSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 PPP2R5D-206ENST00000472118 2963 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 ABCG5-202ENST00000405322 2896 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 PLEKHB2-207ENST00000438882 1460 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 API5-202ENST00000420461 2009 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 CARNMT1-202ENST00000376834 4130 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 RASGRF1-203ENST00000558480 6237 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 AC007326.2-201ENST00000624224 7579 ntBASIC15.16■□□□□ 0.02
MID1O15344 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 CNN1-210ENST00000592923 1848 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 UBE2G2-201ENST00000330942 721 ntTSL 3 BASIC15.16■□□□□ 0.02
MID1O15344 PNRC1-203ENST00000369472 816 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 KLK8-204ENST00000391806 1051 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 PTPA-218ENST00000435132 618 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 AC004898.1-201ENST00000451057 766 ntBASIC15.16■□□□□ 0.02
MID1O15344 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC15.16■□□□□ 0.02
MID1O15344 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC15.16■□□□□ 0.02
MID1O15344 NCK2-206ENST00000522586 490 ntTSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC15.16■□□□□ 0.02
MID1O15344 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 AKIP1-210ENST00000534147 1022 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 AC110285.3-201ENST00000574472 665 ntTSL 3 BASIC15.16■□□□□ 0.02
MID1O15344 AL606495.2-201ENST00000605867 535 ntBASIC15.16■□□□□ 0.02
MID1O15344 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 ARMC8-220ENST00000489213 1714 ntTSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 PAXBP1-202ENST00000331923 3995 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 ENDOV-213ENST00000520367 2680 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 CAP2-206ENST00000489374 1430 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 NUTM2F-201ENST00000253262 2561 ntAPPRIS P2 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 PPM1F-202ENST00000397495 1778 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 NOS1AP-205ENST00000493151 5559 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
MID1O15344 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC15.16■□□□□ 0.02
MID1O15344 TFAP2A-201ENST00000319516 2035 ntTSL 5 BASIC15.16■□□□□ 0.02
MID1O15344 ATE1-209ENST00000543447 4826 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 HNRNPF-201ENST00000337970 2186 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 RECQL4-209ENST00000617875 3809 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 MGRN1-206ENST00000586183 1841 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 GNS-201ENST00000258145 5122 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 RUNX1-202ENST00000344691 7274 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 AC136621.1-201ENST00000624017 2304 ntBASIC15.15■□□□□ 0.02
MID1O15344 LARP6-201ENST00000299213 4469 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 ZXDA-201ENST00000358697 4113 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MID1O15344 AKR1B15-202ENST00000457545 1621 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 HGNC:18790-202ENST00000421177 4172 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC15.15■□□□□ 0.02
MID1O15344 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MID1O15344 WDR54-201ENST00000348227 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 LMO4-201ENST00000370542 1260 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC15.15■□□□□ 0.02
MID1O15344 LENEP-202ENST00000392487 555 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 NDUFAB1P1-201ENST00000404262 460 ntBASIC15.15■□□□□ 0.02
MID1O15344 POM121L10P-201ENST00000436994 1285 ntBASIC15.15■□□□□ 0.02
MID1O15344 CHMP1AP1-201ENST00000445563 662 ntBASIC15.15■□□□□ 0.02
MID1O15344 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 LAMA5-AS1-203ENST00000478167 690 ntTSL 3 BASIC15.15■□□□□ 0.02
MID1O15344 SMIM24-203ENST00000587847 820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 SEPT9-233ENST00000590917 541 ntTSL 4 BASIC15.15■□□□□ 0.02
MID1O15344 AP001002.3-201ENST00000623482 206 ntBASIC15.15■□□□□ 0.02
MID1O15344 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 MEF2C-AS1-210ENST00000514011 1754 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 GCK-203ENST00000395796 2539 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 SLC43A2-202ENST00000412517 1658 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 MYCN-202ENST00000638417 1693 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 FLJ42969-201ENST00000514926 1948 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 NR1H3-235ENST00000616973 1919 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 ELOF1-203ENST00000586683 2154 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 PI4KAP1-201ENST00000610959 2425 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 HS2ST1-201ENST00000370550 6736 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
MID1O15344 CAMK2D-207ENST00000505990 1802 ntTSL 5 BASIC15.15■□□□□ 0.02
MID1O15344 NUDT16P1-202ENST00000499077 2208 ntTSL 2 BASIC15.15■□□□□ 0.02
MID1O15344 PPP1R26-206ENST00000605660 4502 ntAPPRIS P1 BASIC15.15■□□□□ 0.02
MID1O15344 FBLN1-202ENST00000327858 2896 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC15.14■□□□□ 0.01
MID1O15344 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC15.14■□□□□ 0.01
MID1O15344 SLC29A2-207ENST00000619145 2380 ntTSL 5 BASIC15.14■□□□□ 0.01
MID1O15344 CBX7-201ENST00000216133 4081 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms