Protein–RNA interactions for Protein: O00716

E2F3, Transcription factor E2F3, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
E2F3O00716 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC14.83□□□□□ -0.04
E2F3O00716 AC138749.3-201ENST00000567691 622 ntBASIC14.83□□□□□ -0.04
E2F3O00716 LINC01703-202ENST00000602806 595 ntTSL 3 BASIC14.83□□□□□ -0.04
E2F3O00716 AC107373.2-201ENST00000607735 490 ntBASIC14.83□□□□□ -0.04
E2F3O00716 AC116165.1-201ENST00000611806 668 ntBASIC14.83□□□□□ -0.04
E2F3O00716 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC14.83□□□□□ -0.04
E2F3O00716 CREB3L2-208ENST00000620715 1053 ntTSL 5 BASIC14.83□□□□□ -0.04
E2F3O00716 IGHV3-72-202ENST00000621503 303 ntBASIC14.83□□□□□ -0.04
E2F3O00716 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC14.83□□□□□ -0.04
E2F3O00716 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC14.83□□□□□ -0.04
E2F3O00716 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
E2F3O00716 CACNA2D3-202ENST00000415676 3661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 CUL3-201ENST00000264414 6741 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 SIK1-201ENST00000270162 4712 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 CU639417.2-201ENST00000613488 4705 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.83□□□□□ -0.04
E2F3O00716 AP001627.1-201ENST00000437426 1754 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC14.83□□□□□ -0.04
E2F3O00716 PDE1B-207ENST00000550620 2150 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
E2F3O00716 VRK3-207ENST00000594092 1831 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 PIMREG-201ENST00000250056 1473 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 TOMM70-201ENST00000284320 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 SEPT9-208ENST00000541152 3026 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 LINC00839-202ENST00000429940 2253 ntTSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 TNXB-208ENST00000611016 6083 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 SRPK1-204ENST00000373825 4592 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 AC113367.3-201ENST00000508316 1912 ntBASIC14.82□□□□□ -0.04
E2F3O00716 LARP4-219ENST00000614335 1949 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 GGT1-201ENST00000248923 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 TBC1D26-206ENST00000579428 1583 ntTSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 ADAM15-201ENST00000271836 2799 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 FCHSD2-204ENST00000409418 3154 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 MBNL1-202ENST00000282488 6458 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 AL158070.2-201ENST00000623713 1621 ntBASIC14.82□□□□□ -0.04
E2F3O00716 CRB2-201ENST00000359999 3659 ntTSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 EFNB1-201ENST00000204961 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 CXorf40A-201ENST00000359293 974 ntAPPRIS P3 TSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC14.82□□□□□ -0.04
E2F3O00716 S100A16-202ENST00000368704 1146 ntAPPRIS P1 TSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 BEX2-202ENST00000372677 899 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 MPV17-203ENST00000380044 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 RABL2A-203ENST00000393166 1052 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 MPV17-208ENST00000405076 603 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 MNX1-AS2-201ENST00000429228 374 ntTSL 3 BASIC14.82□□□□□ -0.04
E2F3O00716 RN7SL399P-201ENST00000471648 279 ntBASIC14.82□□□□□ -0.04
E2F3O00716 AC106886.2-201ENST00000483578 883 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.82□□□□□ -0.04
E2F3O00716 CSF1R-209ENST00000543093 921 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 HILS1-202ENST00000545329 423 ntBASIC14.82□□□□□ -0.04
E2F3O00716 AL096870.1-201ENST00000555591 930 ntAPPRIS P1 TSL 4 BASIC14.82□□□□□ -0.04
E2F3O00716 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC14.82□□□□□ -0.04
E2F3O00716 AL049840.4-201ENST00000602422 811 ntBASIC14.82□□□□□ -0.04
E2F3O00716 GNRHR2-204ENST00000604273 1078 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 SLC35A2-204ENST00000376521 3047 ntAPPRIS ALT1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 TC2N-206ENST00000556018 1770 ntTSL 2 BASIC14.82□□□□□ -0.04
E2F3O00716 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 LTBP2-201ENST00000261978 8567 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 PHYHD1-202ENST00000353176 1374 ntTSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 BORCS8-MEF2B-203ENST00000514819 1406 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
E2F3O00716 BRF1-211ENST00000547530 3358 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 NR1H3-203ENST00000405853 1480 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
E2F3O00716 VAC14-202ENST00000536184 2161 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 ANKRD35-201ENST00000355594 3342 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 AL138799.1-201ENST00000448213 1675 ntBASIC14.81□□□□□ -0.04
E2F3O00716 SALL3-205ENST00000575389 3996 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 EI24-214ENST00000620753 1718 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 ZMYND15-201ENST00000269289 2448 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 C16orf52-202ENST00000542527 4360 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 AC139749.1-202ENST00000617529 3139 ntBASIC14.81□□□□□ -0.04
E2F3O00716 FAM110C-201ENST00000327669 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 XRRA1-202ENST00000340360 5681 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 KDM5C-205ENST00000404049 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
E2F3O00716 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 TSPAN4-201ENST00000346501 882 ntTSL 3 BASIC14.81□□□□□ -0.04
E2F3O00716 ITIH1-202ENST00000405128 1122 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 DFFBP1-201ENST00000433250 979 ntBASIC14.81□□□□□ -0.04
E2F3O00716 LINC00229-201ENST00000443783 500 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 GNAQP1-201ENST00000444815 1067 ntBASIC14.81□□□□□ -0.04
E2F3O00716 GIMAP3P-201ENST00000495150 836 ntBASIC14.81□□□□□ -0.04
E2F3O00716 DOC2GP-202ENST00000514950 1163 ntBASIC14.81□□□□□ -0.04
E2F3O00716 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 LINC01605-204ENST00000522718 1093 ntTSL 3 BASIC14.81□□□□□ -0.04
E2F3O00716 IFITM2-204ENST00000533141 588 ntAPPRIS ALT2 TSL 4 BASIC14.81□□□□□ -0.04
E2F3O00716 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC14.81□□□□□ -0.04
E2F3O00716 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC14.81□□□□□ -0.04
E2F3O00716 AC011499.1-201ENST00000586012 581 ntAPPRIS P1 TSL 3 BASIC14.81□□□□□ -0.04
E2F3O00716 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC14.81□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 33.3 ms