Protein–RNA interactions for Protein: O00533

CHL1, Neural cell adhesion molecule L1-like protein, humanhuman

Predictions only

Length 1,208 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1O00533 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
CHL1O00533 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHL1O00533 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 SMAD6-201ENST00000288840 3835 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 TRMT11-201ENST00000334379 1565 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 SLC25A32-201ENST00000297578 2891 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 RNF157-AS1-204ENST00000590137 1812 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 E2F3P2-201ENST00000447755 1422 ntBASIC19.28■□□□□ 0.68
CHL1O00533 CLDN22-201ENST00000323319 2581 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHL1O00533 SCAF11-204ENST00000395454 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 HVCN1-202ENST00000356742 2189 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 C1orf123-201ENST00000294360 1085 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 CCDC88B-201ENST00000301897 870 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 CLIC1-206ENST00000375779 1127 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
CHL1O00533 AK6-201ENST00000380818 1183 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC19.28■□□□□ 0.68
CHL1O00533 HNRNPA1P63-201ENST00000427917 963 ntBASIC19.28■□□□□ 0.68
CHL1O00533 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 PAX5-211ENST00000522003 1019 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 PPP1R32-205ENST00000538185 1107 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 DUX4L46-201ENST00000566845 751 ntBASIC19.28■□□□□ 0.68
CHL1O00533 TXNDC17-202ENST00000570330 459 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 LRRC37A6P-204ENST00000575554 573 ntTSL 3 BASIC19.28■□□□□ 0.68
CHL1O00533 AC145343.1-201ENST00000579629 650 ntTSL 3 BASIC19.28■□□□□ 0.68
CHL1O00533 GPR182-203ENST00000622922 591 ntBASIC19.28■□□□□ 0.68
CHL1O00533 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 ALAS2-201ENST00000330807 2027 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 MCFD2-201ENST00000319466 4182 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC19.28■□□□□ 0.68
CHL1O00533 PDZD4-202ENST00000393758 3763 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 NRBF2-201ENST00000277746 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 PEF1-201ENST00000373703 1629 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 RABL2B-202ENST00000395590 2380 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 AC020907.1-201ENST00000616460 1350 ntBASIC19.28■□□□□ 0.68
CHL1O00533 SFRP1-201ENST00000220772 4492 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 DUOXA1-210ENST00000559014 1965 ntTSL 2 BASIC19.28■□□□□ 0.68
CHL1O00533 CHST14-201ENST00000306243 3574 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
CHL1O00533 AC003986.2-201ENST00000419944 1711 ntTSL 3 BASIC19.28■□□□□ 0.68
CHL1O00533 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 GATA3-201ENST00000346208 2654 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
CHL1O00533 MEIKIN-203ENST00000442687 1315 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 B4GALT3-201ENST00000319769 1911 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 SH3KBP1-201ENST00000379697 1944 ntTSL 5 BASIC19.27■□□□□ 0.68
CHL1O00533 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 AZGP1-202ENST00000411734 2027 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC19.27■□□□□ 0.68
CHL1O00533 HARS-202ENST00000415192 1401 ntTSL 2 BASIC19.27■□□□□ 0.68
CHL1O00533 DEGS1-201ENST00000323699 2101 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 BCAR3-210ENST00000539242 2114 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC19.27■□□□□ 0.68
CHL1O00533 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
CHL1O00533 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC19.27■□□□□ 0.68
CHL1O00533 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC19.27■□□□□ 0.68
CHL1O00533 AC022748.3-201ENST00000621828 275 ntBASIC19.27■□□□□ 0.68
CHL1O00533 CLIP4-201ENST00000320081 4293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 LYRM1-203ENST00000412082 1399 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 HM13-201ENST00000335574 1809 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
CHL1O00533 SIGLEC6-202ENST00000346477 1940 ntAPPRIS ALT2 TSL 2 BASIC19.27■□□□□ 0.67
CHL1O00533 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
CHL1O00533 POFUT2-214ENST00000615172 2472 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 ASB10-204ENST00000420175 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 EIF2S2-201ENST00000374980 2656 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 CELF3-201ENST00000290583 3246 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 CALCR-203ENST00000394441 1774 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
CHL1O00533 CHSY3-201ENST00000305031 3850 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 EPS8-201ENST00000281172 4061 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHL1O00533 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHL1O00533 PLAGL1-208ENST00000437412 2640 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 LRRC47-201ENST00000378251 4310 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 KHK-201ENST00000260598 2397 ntAPPRIS P5 TSL 2 BASIC19.26■□□□□ 0.67
CHL1O00533 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 AGPAT1-201ENST00000336984 2021 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
CHL1O00533 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 PUDPP3-201ENST00000445368 636 ntBASIC19.26■□□□□ 0.67
CHL1O00533 AC004898.1-201ENST00000451057 766 ntBASIC19.26■□□□□ 0.67
CHL1O00533 AC104596.1-201ENST00000507826 579 ntTSL 4 BASIC19.26■□□□□ 0.67
CHL1O00533 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC19.26■□□□□ 0.67
CHL1O00533 CRHR1-208ENST00000577353 1206 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 ACSS2-202ENST00000360596 3065 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 SLC39A1-201ENST00000310483 2427 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
CHL1O00533 DYRK1A-203ENST00000398956 1590 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 IFT52-201ENST00000373030 1757 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
CHL1O00533 LINC02495-201ENST00000508601 4167 ntTSL 2 BASIC19.26■□□□□ 0.67
CHL1O00533 MAGED2-201ENST00000218439 1958 ntAPPRIS P2 TSL 5 BASIC19.26■□□□□ 0.67
CHL1O00533 GRB7-204ENST00000394211 2093 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms