Protein–RNA interactions for Protein: A0A096LP49

CCDC187, Coiled-coil domain-containing protein 187, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC187A0A096LP49 TMEM184C-204ENST00000508208 1528 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SIN3B-201ENST00000248054 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SMC4-204ENST00000462787 5033 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 DRC3-216ENST00000584166 1953 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 NEUROD1-201ENST00000295108 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 RAPSN-201ENST00000298854 1671 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 BTBD10-208ENST00000528120 1662 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 CRISPLD2-203ENST00000564567 1651 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 GAD1-203ENST00000375272 1252 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 FGF14-202ENST00000376143 744 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 ANKDD1A-203ENST00000395723 1250 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 PUDPP3-201ENST00000445368 636 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AL353637.1-201ENST00000451571 732 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC234782.1-201ENST00000451950 919 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 LDHBP1-201ENST00000455730 1119 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 PABPC5-AS1-201ENST00000456187 426 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SLC12A8-207ENST00000469902 2989 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC008438.1-201ENST00000507521 549 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 FADS2-212ENST00000522639 360 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC090735.1-201ENST00000523881 488 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC100818.1-201ENST00000524167 563 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC124301.1-201ENST00000524885 602 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AL132642.1-201ENST00000557646 553 ntTSL 4 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 FADS2-215ENST00000574708 385 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 FAAP24-204ENST00000590179 784 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AL133499.1-201ENST00000596207 608 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 PCBP2-OT1-201ENST00000634357 590 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SHC1P1-201ENST00000425230 1745 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 RSPH3-201ENST00000252655 2175 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AL360270.3-201ENST00000609118 1348 ntBASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 PTGES3L-AARSD1-201ENST00000360221 1790 ntTSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 TGFB1I1-201ENST00000361773 1773 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 LZTR1-201ENST00000215739 4572 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 H2BFM-201ENST00000355016 1882 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 STEAP3-202ENST00000393107 1871 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 CLCN7-202ENST00000382745 4720 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 CTNND2-214ENST00000511377 4336 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 DIRAS2-201ENST00000375765 4386 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 ADAD1-201ENST00000296513 1961 ntAPPRIS P1 TSL 2 BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 NCAPH2-201ENST00000299821 1996 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 DNAAF2-201ENST00000298292 2963 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
CCDC187A0A096LP49 METTL25-201ENST00000248306 2093 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AP003680.1-201ENST00000598970 3660 ntBASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SLC35C2-202ENST00000317734 2175 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PLIN1-202ENST00000430628 2900 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 CHD1L-203ENST00000369259 2358 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 WAC-203ENST00000354911 3042 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 MAMSTR-201ENST00000318083 1837 ntAPPRIS P1 TSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PCBP2-202ENST00000359462 1814 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 MAPK13-203ENST00000373766 6196 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 FAM83C-201ENST00000374408 3145 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PSMB5-202ENST00000361611 1294 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 ERBB3-202ENST00000411731 1027 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 LIMS1-206ENST00000414829 439 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PSMB5-203ENST00000425762 900 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AP000356.1-201ENST00000438893 364 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 ARMCX3-AS1-201ENST00000454228 490 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 LIMS3-205ENST00000487150 782 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 NDUFC2-204ENST00000528164 561 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 TPD52L1-208ENST00000528193 789 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 DUX4L46-201ENST00000566845 751 ntBASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AC090386.1-202ENST00000586610 469 ntTSL 3 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AL353770.1-201ENST00000614915 403 ntBASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 MIR7845-201ENST00000618396 99 ntBASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 AL139423.1-201ENST00000606802 7923 ntTSL 5 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 VPS26A-201ENST00000263559 2697 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 VIPR1-217ENST00000543411 2681 ntTSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 CPD-201ENST00000225719 9394 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 FBXO28-201ENST00000366862 5451 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 LRRN2-203ENST00000367177 3463 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 DZIP1L-204ENST00000469243 2107 ntAPPRIS ALT2 TSL 2 BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 NFATC4-213ENST00000554591 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
CCDC187A0A096LP49 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC14.3□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 42 ms