Protein–RNA interactions for Protein: Q9Y5F3

PCDHB1, Protocadherin beta-1, humanhuman

Predictions only

Length 818 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB1Q9Y5F3 GEMIN4-202ENST00000437269 1182 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC106786.2-201ENST00000506859 561 ntTSL 4 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC008808.1-201ENST00000508923 432 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ZNF7-206ENST00000528130 1134 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 PTP4A1P2-201ENST00000546033 454 ntBASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 CX3CL1-203ENST00000564948 563 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC093813.1-201ENST00000605066 256 ntBASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 ZCCHC17-206ENST00000616393 1534 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 PTPN5-202ENST00000396166 2299 ntTSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 HGNC:18790-203ENST00000433139 2254 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 KRAS-202ENST00000311936 5765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TMEM106C-201ENST00000256686 1394 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 PRPF40B-201ENST00000261897 3602 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 UBE2D3-207ENST00000394801 2368 ntAPPRIS ALT1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TMEM222-211ENST00000611517 1613 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 XKR5-201ENST00000618742 4893 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 GPR84-201ENST00000267015 1497 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 CPEB3-201ENST00000265997 4851 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 AC018755.2-201ENST00000599649 1837 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 GPN1-212ENST00000616939 1832 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC15.2■□□□□ 0.02
PCDHB1Q9Y5F3 TCEAL4-209ENST00000472745 1571 ntAPPRIS P3 TSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TMEM117-201ENST00000266534 2758 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TMEM92-201ENST00000300433 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 ZCCHC4-201ENST00000302874 2785 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 HMGA2-210ENST00000541363 8094 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 PLD3-201ENST00000356508 1906 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 PRODH2-201ENST00000301175 1677 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 XK-201ENST00000378616 5206 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 GFRA2-204ENST00000518077 1503 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 CASQ1-201ENST00000368078 1897 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TJAP1-207ENST00000436109 2572 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 GRK5-202ENST00000392870 2654 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 ACE3P-201ENST00000423435 1973 ntBASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TBXAS1-208ENST00000448866 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 KRTAP19-3-201ENST00000334063 522 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 HIST3H2A-201ENST00000366695 895 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 PRKN-203ENST00000366894 1157 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 LCE1E-202ENST00000368771 575 ntAPPRIS P2 TSL 3 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 SS18L1-202ENST00000370848 1238 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 VDAC1P7-201ENST00000462417 847 ntBASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 CRYGN-205ENST00000491928 698 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AGER-214ENST00000538695 487 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 GCHFR-203ENST00000558670 412 ntTSL 3 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AC011497.1-201ENST00000596781 561 ntTSL 4 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 LINC02351-201ENST00000614728 289 ntTSL 2 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AGER-215ENST00000620802 737 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AC099795.1-202ENST00000640492 759 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 CYP4F22-201ENST00000269703 2641 ntAPPRIS P1 TSL 2 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AC007787.1-201ENST00000588095 1583 ntBASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 C18orf25-206ENST00000619301 5264 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 SIDT1-202ENST00000393830 2572 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 AL138799.1-201ENST00000448213 1675 ntBASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 INPP5B-204ENST00000373026 3230 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 ZNF252P-AS1-201ENST00000527067 3236 ntBASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 ZKSCAN7-202ENST00000341840 1757 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 SP140L-204ENST00000444636 1781 ntTSL 5 BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 MBD1-217ENST00000588937 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
PCDHB1Q9Y5F3 MIR600HG-201ENST00000449175 5984 ntBASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 AL353997.2-201ENST00000579352 4955 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 APPL1-201ENST00000288266 6058 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 ADPRHL1-202ENST00000375418 1341 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 MFN2-203ENST00000444836 4531 ntAPPRIS P1 TSL 2 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 MAGEA8-205ENST00000542674 2084 ntAPPRIS P1 TSL 3 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 CALD1-222ENST00000495522 2199 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 LINC00528-201ENST00000600723 2160 ntBASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 LHX5-201ENST00000261731 2939 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 MPPE1-201ENST00000309976 1636 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 MIER1-209ENST00000401042 1648 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 AC013726.1-201ENST00000563747 2285 ntBASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 TP73-213ENST00000604479 1623 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 TNXB-209ENST00000613214 6842 ntTSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 GHRLOS-201ENST00000439539 1708 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 NUP62-212ENST00000597723 1824 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 INTS4P2-202ENST00000614726 2019 ntBASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 BDP1-202ENST00000380675 2861 ntAPPRIS ALT2 TSL 5 BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 TSFM-201ENST00000323833 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 IFNL2-201ENST00000331982 737 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
PCDHB1Q9Y5F3 NTMT1-202ENST00000372481 741 ntTSL 2 BASIC15.18■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 68.8 ms