Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 KIF26B-202ENST00000407071 7287 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 APOLD1-201ENST00000326765 4724 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 FAM46C-201ENST00000369448 5751 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 C18orf15-201ENST00000623680 2534 ntBASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 SYNPO2L-202ENST00000394810 4921 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 KIAA1586-201ENST00000370733 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 TSNARE1-201ENST00000307180 1907 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 HEY1-201ENST00000337919 2296 ntAPPRIS ALT1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 THOC5-203ENST00000397872 2676 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 POP4-201ENST00000221770 2321 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 MSI2-206ENST00000579180 1635 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 GYPC-201ENST00000259254 1246 ntAPPRIS P3 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 ACKR1-201ENST00000368121 1240 ntBASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 TEX30-203ENST00000376022 828 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 BRF1-202ENST00000379932 884 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 PDGFB-202ENST00000381551 1125 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 NGDN-202ENST00000408901 1143 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 MIR1908-201ENST00000410394 80 ntBASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AL355994.2-201ENST00000447882 704 ntBASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 STAG3L5P-205ENST00000473757 1255 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AC022137.2-201ENST00000503482 481 ntBASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AC024619.2-201ENST00000581964 517 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 FBXL12-211ENST00000591009 1005 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 AC020911.1-201ENST00000591038 578 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 LINC00996-201ENST00000477392 2043 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 BCL11B-201ENST00000345514 7603 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 FADS2-210ENST00000522056 1689 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 TSG101-204ENST00000536719 2101 ntTSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 STAU2-219ENST00000522509 2173 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 SEPT8-206ENST00000378706 4168 ntAPPRIS ALT1 TSL 5 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 TSC22D3-201ENST00000315660 2213 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 PRKAG3-206ENST00000529249 2222 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 UCP3-202ENST00000426995 1406 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 DCUN1D4-203ENST00000451288 4269 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 C12orf73-207ENST00000549478 1446 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 SNAPC1-201ENST00000216294 2656 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 MAP2K3-202ENST00000342679 2303 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC14.06□□□□□ -0.16
NPIPA1Q9UND3 KSR1-216ENST00000582410 2392 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 GRAMD4-203ENST00000408031 2834 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 KIF18B-203ENST00000590129 2569 ntAPPRIS ALT2 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 BAG4-201ENST00000287322 4453 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 UCP2-201ENST00000310473 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 SYNRG-223ENST00000616179 4050 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 ARHGAP23-221ENST00000620417 3663 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 SLC47A1-203ENST00000436810 1719 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 RBPMS2-202ENST00000560606 1746 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 CHRNG-202ENST00000389494 2262 ntAPPRIS P1 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 PCDHB14-201ENST00000239449 4828 ntAPPRIS P1 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 UPK3A-201ENST00000216211 1051 ntAPPRIS P3 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 NAT8-201ENST00000272425 947 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AL157935.1-209ENST00000415141 1105 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AL583835.2-202ENST00000421363 1104 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 LYPLAL1-AS1-201ENST00000441331 724 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 YBX1P6-201ENST00000442962 1002 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TMEM14B-204ENST00000461342 559 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 LCN10-206ENST00000527229 615 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 RPL8-205ENST00000527914 551 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC079316.1-201ENST00000548397 411 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 LINC02299-201ENST00000556669 430 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC010491.1-202ENST00000567048 528 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 KSR1-207ENST00000578981 748 ntTSL 4 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC015910.1-201ENST00000579400 975 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC010641.1-201ENST00000591757 529 ntTSL 3 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC010328.2-201ENST00000597698 1111 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 GPR182-203ENST00000622922 591 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 POMT1-205ENST00000404875 2821 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 LANCL2-201ENST00000254770 4353 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 CUX1-214ENST00000550008 4350 ntAPPRIS ALT2 TSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TUBB1P2-201ENST00000422712 1306 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TUBB1P1-201ENST00000503144 1300 ntBASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TGFB1I1-203ENST00000394863 1898 ntAPPRIS ALT1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 VARS2-201ENST00000321897 4073 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 STYXL1-203ENST00000359697 1374 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AC023024.1-201ENST00000558838 2590 ntTSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 CNOT8-202ENST00000403027 2604 ntAPPRIS P1 TSL 1 (best) BASIC14.05□□□□□ -0.16
NPIPA1Q9UND3 TRPC6-206ENST00000532133 2648 ntTSL 5 BASIC14.05□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms