Protein–RNA interactions for Protein: Q9UFD9

RIMBP3, RIMS-binding protein 3A, humanhuman

Predictions only

Length 1,639 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIMBP3Q9UFD9 HNRNPA1P10-201ENST00000444945 962 ntBASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 RN7SL788P-201ENST00000460504 316 ntBASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 SLC13A2-205ENST00000545060 1276 ntTSL 5 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 BX322562.1-201ENST00000617004 561 ntBASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 HPN-201ENST00000262626 2363 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 HHATL-205ENST00000441594 1865 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 ODCP-201ENST00000459650 1639 ntBASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 CLP1-202ENST00000525602 1392 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 C5orf24-204ENST00000504727 2923 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 RHOC-201ENST00000285735 2199 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 MGME1-202ENST00000377709 1936 ntTSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC23.05■■□□□ 1.28
RIMBP3Q9UFD9 TRPM3-205ENST00000361823 1260 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 PAX5-203ENST00000377847 996 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 MRPL48-203ENST00000398483 1058 ntTSL 3 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 R3HDM2P2-201ENST00000401880 2116 ntBASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AC011284.1-201ENST00000427920 856 ntTSL 4 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 EIF2B5-202ENST00000432569 984 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 RPSAP70-201ENST00000504462 864 ntBASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 PAX5-213ENST00000523145 830 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 LIMD2-210ENST00000582055 509 ntTSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 RBM24-202ENST00000379052 2703 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 MPP1-205ENST00000413259 2195 ntTSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 CPNE6-201ENST00000397016 2235 ntAPPRIS P1 TSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 CPNE6-203ENST00000537691 2233 ntTSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 MCRS1-203ENST00000546244 1686 ntTSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 PRL-201ENST00000306482 1354 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 SEC13-202ENST00000350697 1425 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 RIBC1-202ENST00000375327 1420 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 TUBAL3-201ENST00000380419 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 KLHL36-204ENST00000564996 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 SGK2-206ENST00000423407 1915 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 ASAH1-221ENST00000636128 1608 ntTSL 5 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AL359092.2-201ENST00000423330 585 ntBASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AC010285.2-201ENST00000510240 569 ntTSL 4 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 IGHVIII-5-2-201ENST00000522505 261 ntBASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AC087442.1-201ENST00000525563 249 ntTSL 2 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 AL359091.4-201ENST00000610052 409 ntBASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 CCDC32-215ENST00000625629 801 ntTSL 5 BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 SPIRE2-201ENST00000378247 3235 ntAPPRIS P2 TSL 1 (best) BASIC23.04■■□□□ 1.28
RIMBP3Q9UFD9 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 GOSR2-211ENST00000623037 1814 ntTSL 5 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 TGM1-202ENST00000544573 1581 ntTSL 2 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 NOP14-AS1-201ENST00000503709 1616 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 VAC14-AS1-201ENST00000398177 2145 ntTSL 2 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 HMBOX1-210ENST00000523613 1730 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 RGS6-217ENST00000555571 1764 ntAPPRIS P3 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 MIR193A-201ENST00000384882 88 ntBASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 U3.41-201ENST00000408711 219 ntBASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 CR936218.2-201ENST00000574252 759 ntTSL 3 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 AC048380.1-201ENST00000589818 465 ntTSL 3 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 HKR1-220ENST00000591259 734 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 SLC2A9-202ENST00000309065 1866 ntAPPRIS ALT2 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 CNMD-203ENST00000448904 1444 ntAPPRIS ALT1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC23.03■■□□□ 1.28
RIMBP3Q9UFD9 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 REL-202ENST00000394479 2398 ntAPPRIS ALT2 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 NOC2LP2-201ENST00000407594 1944 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 DPY19L2P4-202ENST00000497063 2018 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 FAM138B-202ENST00000446648 1130 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 FAM138C-202ENST00000449442 1126 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 OR2A1-AS1-203ENST00000468575 568 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 CRYAB-213ENST00000533475 1119 ntAPPRIS P1 TSL 5 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 METTL7AP1-201ENST00000547343 496 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AL592146.2-201ENST00000565388 444 ntTSL 5 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 RN7SL480P-201ENST00000581481 294 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 MIR6819-201ENST00000622122 61 ntBASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 FAM138F-201ENST00000631376 1183 ntTSL 1 (best) BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 MVK-217ENST00000639206 367 ntTSL 5 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 APLP1-202ENST00000537454 2266 ntTSL 2 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC23.02■■□□□ 1.28
RIMBP3Q9UFD9 NEFHP1-201ENST00000412845 2629 ntBASIC23.02■■□□□ 1.28
Retrieved 100 of 98,524 protein–RNA pairs in 53.5 ms