Protein–RNA interactions for Protein: Q9NRG0

CHRAC1, Chromatin accessibility complex protein 1, humanhuman

Predictions only

Length 131 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHRAC1Q9NRG0 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 RPL15-201ENST00000307839 2730 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 AC104758.3-201ENST00000563349 1453 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 TEAD3-201ENST00000338863 2983 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 DDX19A-202ENST00000417604 1703 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 CTNNBL1-209ENST00000621317 1990 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 MCM3AP-AS1-203ENST00000421927 2280 ntTSL 2 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 TMEM209-202ENST00000462753 2322 ntAPPRIS ALT1 TSL 5 BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
CHRAC1Q9NRG0 RGPD6-202ENST00000330331 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 RGPD8-202ENST00000330575 2848 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 DTX3-202ENST00000548198 3199 ntAPPRIS P3 TSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 CCAR2-201ENST00000308511 4853 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 PAF1-201ENST00000221265 2066 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 MRPL2-201ENST00000230413 899 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 GPD1L-201ENST00000282541 4060 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TMEM230-202ENST00000342308 1562 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 PKIG-202ENST00000372886 1180 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TRIM74-202ENST00000395244 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AL645937.2-201ENST00000396808 931 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 DERL3-204ENST00000406855 1063 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC134915.1-201ENST00000426461 574 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TRIM73-204ENST00000447409 1286 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AP001360.1-202ENST00000526934 479 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TMEM218-210ENST00000529609 734 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC055876.2-201ENST00000531834 546 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC079336.2-201ENST00000578408 927 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 MIF4GD-206ENST00000579119 856 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AP001033.1-201ENST00000584509 466 ntTSL 3 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC011466.1-201ENST00000595201 566 ntTSL 4 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC099568.2-201ENST00000609194 695 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 INTS4P2-202ENST00000614726 2019 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 SLC38A5-212ENST00000619100 2100 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 AC005089.1-201ENST00000619486 2241 ntBASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 SLC38A5-214ENST00000622196 2100 ntTSL 5 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TAMM41-212ENST00000630288 607 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 KIF21A-202ENST00000361961 6601 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 FAM149B1-201ENST00000242505 5408 ntAPPRIS P1 TSL 5 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 TOX3-201ENST00000219746 3233 ntAPPRIS P4 TSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 IMPDH1-201ENST00000338791 2881 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 MOCS1-205ENST00000373195 2852 ntTSL 2 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 IMPDH1-217ENST00000626419 2862 ntAPPRIS ALT1 TSL 5 BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 CAMKK2-203ENST00000347034 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 YME1L1-202ENST00000375972 2517 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
CHRAC1Q9NRG0 RBM47-202ENST00000381793 4816 ntAPPRIS ALT1 TSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 C1orf159-202ENST00000379320 2324 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 HCK-209ENST00000538448 2215 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 SPATA7-203ENST00000393545 2123 ntAPPRIS P3 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 FES-203ENST00000394302 2133 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 PATZ1-202ENST00000266269 3781 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 ALG3-207ENST00000455059 1697 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 LZTS1-202ENST00000381569 5706 ntAPPRIS P1 TSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 SEC13-201ENST00000337354 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 TTC39A-208ENST00000413473 2718 ntAPPRIS P4 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 CLN8-205ENST00000520991 1305 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 MRPL55-215ENST00000366742 630 ntAPPRIS P1 TSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 C10orf62-201ENST00000370640 1208 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 NDUFA3-203ENST00000391763 338 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AC098850.1-201ENST00000419919 790 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 GABARAPL1-202ENST00000421801 855 ntTSL 2 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 TSPY16P-201ENST00000449843 468 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AC104596.2-201ENST00000512793 793 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 LSM1-203ENST00000520755 975 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AC120045.2-201ENST00000567334 178 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 DDX50-206ENST00000610822 2510 ntTSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 GOLGA8DP-202ENST00000341390 2184 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 AC023090.2-201ENST00000625182 2110 ntBASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 TMPRSS6-204ENST00000406856 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 RGS9-202ENST00000443584 2078 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 ITPK1-201ENST00000267615 6066 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 STAM-202ENST00000377524 2972 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 ZNF587-203ENST00000423137 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 FARP1-214ENST00000595437 4926 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 BCL10-201ENST00000370580 2819 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 TTLL13P-202ENST00000438251 2738 ntAPPRIS P5 TSL 5 BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 LRRTM1-201ENST00000295057 2599 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
CHRAC1Q9NRG0 ATP2A3-202ENST00000352011 3274 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRAC1Q9NRG0 AMT-204ENST00000427987 1646 ntTSL 5 BASIC15.28■□□□□ 0.04
CHRAC1Q9NRG0 LPAR5-201ENST00000329858 3171 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
CHRAC1Q9NRG0 PTGFRN-201ENST00000393203 6178 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 97.2 ms