Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 DDX19B-203ENST00000393657 1717 ntTSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 SURF6-201ENST00000372022 4447 ntAPPRIS P1 TSL 1 (best) BASIC15.74■□□□□ 0.11
HPS4Q9NQG7 RAB9A-202ENST00000464506 2039 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AXIN2-202ENST00000375702 2541 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC144831.1-201ENST00000573312 2656 ntBASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AP4B1-204ENST00000369569 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 TPD52L2-205ENST00000352482 2339 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 TPD52L2-210ENST00000615907 2310 ntTSL 4 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC127383.1-201ENST00000444697 1800 ntBASIC15.73■□□□□ 0.11
HPS4Q9NQG7 MCHR2-202ENST00000369212 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 ZP3-201ENST00000336517 1483 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 ITPKB-201ENST00000272117 5822 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 DBI-203ENST00000393103 599 ntAPPRIS P4 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 KRTAP10-13P-201ENST00000412914 571 ntBASIC15.73■□□□□ 0.11
HPS4Q9NQG7 TMEM210-201ENST00000413619 873 ntAPPRIS P1 TSL 5 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 SAP30L-202ENST00000426761 777 ntTSL 3 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AL162742.1-201ENST00000434792 954 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC004898.1-201ENST00000451057 766 ntBASIC15.73■□□□□ 0.11
HPS4Q9NQG7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC093879.1-201ENST00000508959 1176 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 ANAPC13-205ENST00000511751 896 ntAPPRIS P1 TSL 3 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 UBXN1-218ENST00000616865 1002 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC092506.1-204ENST00000634888 1066 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 DIXDC1-201ENST00000440460 5897 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 LRRFIP2-205ENST00000421276 2522 ntTSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 MAGEA2-204ENST00000611674 1728 ntAPPRIS P1 TSL 2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 NFATC4-204ENST00000424781 5488 ntAPPRIS ALT2 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 GRAMD2B-217ENST00000515200 3109 ntTSL 5 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 NANOS1-202ENST00000425699 4017 ntAPPRIS P2 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 RSPO1-203ENST00000612451 2463 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 ITPRIPL2-201ENST00000381440 7247 ntAPPRIS P1 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 SYBU-205ENST00000422135 3226 ntAPPRIS ALT2 TSL 5 BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 MPP1-204ENST00000393531 1389 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 GCFC2-201ENST00000321027 4440 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 HSD17B6-201ENST00000322165 1512 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 NLE1-202ENST00000442241 2588 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 LMF2-202ENST00000474879 2582 ntAPPRIS P1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 ARHGAP5-205ENST00000433497 3047 ntTSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 DNM1-208ENST00000486160 3181 ntAPPRIS ALT1 TSL 1 (best) BASIC15.73■□□□□ 0.11
HPS4Q9NQG7 POM121-202ENST00000395270 7011 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 PRSS50-201ENST00000460241 2960 ntAPPRIS P1 TSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 RBCK1-201ENST00000353660 2511 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ABHD3-201ENST00000289119 2064 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 SALL4-203ENST00000395997 1918 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 INTS11-203ENST00000419704 1798 ntTSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CASR-202ENST00000498619 5009 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 GLG1-202ENST00000422840 4748 ntAPPRIS ALT2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 HILPDA-201ENST00000257696 1349 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CENPBD1P1-204ENST00000487264 1308 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CNST-203ENST00000366513 5126 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 POC1B-202ENST00000393179 3096 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CAAP1-201ENST00000333916 2791 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 TNFRSF14-AS1-202ENST00000432521 3608 ntTSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 TAPBPL-201ENST00000266556 1741 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AL023775.1-201ENST00000454907 1746 ntBASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AC092718.8-201ENST00000640345 2892 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 FEN1-201ENST00000305885 2296 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 EIF3G-201ENST00000253108 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 C8orf74-201ENST00000304519 1036 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ABHD16A-201ENST00000395952 2103 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 MIR663B-201ENST00000408361 115 ntBASIC15.72■□□□□ 0.11
HPS4Q9NQG7 LSM5-207ENST00000410044 687 ntTSL 3 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 LINC01840-201ENST00000421870 571 ntTSL 4 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 GDNF-AS1-201ENST00000503382 604 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CNGA4-202ENST00000533426 936 ntTSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 MAP1LC3B2-202ENST00000556529 660 ntAPPRIS P1 TSL 3 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 IGHV3OR16-8-201ENST00000565407 349 ntAPPRIS P1 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AC136428.1-201ENST00000569103 349 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AC007861.2-201ENST00000573819 571 ntTSL 4 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ANGPTL8-203ENST00000591200 504 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 C11orf71-202ENST00000623205 1980 ntAPPRIS ALT2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AP4M1-206ENST00000429084 1836 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ASNS-201ENST00000175506 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AC096667.1-201ENST00000640078 3465 ntTSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 CARMIL3-201ENST00000342740 4597 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 LY9-204ENST00000368039 1364 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ULK4-203ENST00000420927 1904 ntTSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 GGT6-204ENST00000574154 2482 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 ZMYND12-201ENST00000372565 1775 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 USP35-203ENST00000529308 4216 ntAPPRIS P1 TSL 5 BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 DDX1-201ENST00000233084 2739 ntAPPRIS P1 TSL 1 (best) BASIC15.72■□□□□ 0.11
HPS4Q9NQG7 AP003680.1-201ENST00000598970 3660 ntBASIC15.72■□□□□ 0.11
Retrieved 100 of 98,524 protein–RNA pairs in 67.2 ms