Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 LINC00917-207ENST00000601556 2618 ntTSL 2 BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.4□□□□□ -0.27
KIAA1549Q9HCM3 ARNT2-209ENST00000622346 2932 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SLC22A7-203ENST00000372589 2549 ntAPPRIS ALT2 TSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 API5-203ENST00000455725 2257 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 GPKOW-201ENST00000156109 1742 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AC245123.1-202ENST00000612422 1719 ntTSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 INTS11-204ENST00000421495 1868 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CELF2-206ENST00000608830 1892 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AIFM1-209ENST00000535724 2468 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CMTM3-203ENST00000460097 1797 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 ZNF767P-201ENST00000463567 3520 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PIANP-202ENST00000534837 2695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 ACSF2-202ENST00000427954 2251 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 NPHP4-211ENST00000622020 3004 ntTSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CBY1-201ENST00000216029 1133 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CSH1-201ENST00000316193 900 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SDCCAG3P2-201ENST00000326105 1023 ntBASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 GARS-201ENST00000389266 2634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 TMEM14B-210ENST00000473276 730 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AC092944.1-202ENST00000487238 483 ntTSL 4 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 TPI1-206ENST00000488464 791 ntTSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 BTNL8-205ENST00000505126 1294 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AC113192.2-201ENST00000525320 308 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AURKB-202ENST00000534871 1167 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AP000438.1-201ENST00000543624 749 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 ACYP1-206ENST00000555694 565 ntAPPRIS P1 TSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AC126696.1-201ENST00000561567 756 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 TUBB6-210ENST00000590967 430 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CLEC11A-202ENST00000599973 1026 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 HNRNPUL1-220ENST00000602130 2932 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AL451050.2-201ENST00000606967 682 ntBASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 TMEM14B-220ENST00000612333 888 ntTSL 3 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 KLC4-204ENST00000453940 1945 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AP1S3-206ENST00000443700 1785 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 ELF2-201ENST00000358635 3036 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CDCP2-201ENST00000371330 2723 ntAPPRIS P2 TSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 FKBP4P6-201ENST00000457486 1332 ntBASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 AL354714.1-201ENST00000356006 2136 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 HNRNPK-204ENST00000376263 2942 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PLCH2-203ENST00000378486 4837 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 PLCH2-204ENST00000419816 4837 ntAPPRIS P1 TSL 5 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 CNOT3-204ENST00000447684 2765 ntTSL 2 BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 MAP3K11-201ENST00000309100 3566 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SOCS7-201ENST00000612932 7857 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SUMO1-203ENST00000392246 1536 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 SLC25A34-201ENST00000294454 2986 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 IDH2-201ENST00000330062 2694 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
KIAA1549Q9HCM3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AC018442.1-201ENST00000421439 2061 ntBASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 RUBCNL-212ENST00000631139 1948 ntAPPRIS ALT2 TSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 MMP15-201ENST00000219271 4250 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 LINC01285-201ENST00000412422 2289 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 UBXN1-202ENST00000301935 1153 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 IP6K2-205ENST00000413298 792 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AL355994.3-201ENST00000437156 466 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AL049698.1-202ENST00000441716 757 ntTSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 APOA2-204ENST00000464492 530 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AC091804.1-201ENST00000486888 567 ntBASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 LYRM9-204ENST00000503642 432 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 LINC00621-201ENST00000577004 1177 ntTSL 4 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 HHEX-202ENST00000472590 1605 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 RABL2A-206ENST00000409842 1979 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 UROC1-202ENST00000383579 2735 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 TOMM34-201ENST00000372813 2062 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 MYOC-201ENST00000037502 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 AC079336.5-201ENST00000581360 2480 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 BCAT2-201ENST00000316273 1552 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 KCNG3-201ENST00000306078 3824 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 METTL6-201ENST00000383789 1413 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 ZMYND15-204ENST00000573751 2409 ntTSL 2 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 IRGQ-201ENST00000422989 9685 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
KIAA1549Q9HCM3 PICALM-204ENST00000526033 3613 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms