Protein–RNA interactions for Protein: Q9HBT6

CDH20, Cadherin-20, humanhuman

Predictions only

Length 801 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH20Q9HBT6 TMEM247-204ENST00000434431 680 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ZNF707-203ENST00000442058 562 ntTSL 4 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 Z98749.2-207ENST00000443658 679 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 TMEM191A-209ENST00000452055 788 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 GAPDHP40-201ENST00000505218 1006 ntBASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SLC25A30-AS1-201ENST00000506633 701 ntTSL 3 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 GLI4-203ENST00000517468 963 ntTSL 5 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 HBS1L-208ENST00000525067 582 ntTSL 3 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ENPP7P5-201ENST00000541031 1031 ntBASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 AC004233.1-201ENST00000570515 608 ntTSL 4 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 PAM16-204ENST00000571941 674 ntTSL 3 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 AC027575.2-201ENST00000585258 1295 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LINC02084-201ENST00000606069 1096 ntBASIC13.34□□□□□ -0.27
CDH20Q9HBT6 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 CHRFAM7A-203ENST00000401522 1913 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 FBXL12-208ENST00000589626 1920 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 UVSSA-206ENST00000507531 2597 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 MIRLET7BHG-203ENST00000435439 2264 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 UBL7-AS1-203ENST00000564621 1612 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 FUK-201ENST00000288078 4081 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 PDLIM5-202ENST00000318007 1960 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 SPHK2-202ENST00000340932 2492 ntTSL 5 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 VSIR-201ENST00000394957 4689 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 AKNA-204ENST00000374075 5038 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 AL162457.1-201ENST00000317652 2000 ntTSL 2 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC13.34□□□□□ -0.27
CDH20Q9HBT6 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 LAP3-201ENST00000226299 2213 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 TRIP10-210ENST00000600428 2249 ntTSL 5 BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 KLK15-201ENST00000326856 1389 ntAPPRIS ALT1 TSL 5 BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 PLXNB3-209ENST00000538966 6377 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
CDH20Q9HBT6 UBA5-213ENST00000494238 2997 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 CTSB-220ENST00000531089 1436 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 SUGP2-215ENST00000601879 5546 ntAPPRIS P3 TSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 HSP90B1-201ENST00000299767 2858 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 SUCO-201ENST00000263688 5556 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 PCCB-218ENST00000490504 1613 ntTSL 3 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 RRP1B-201ENST00000340648 5090 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 TEX30-203ENST00000376022 828 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 MAGEA12-203ENST00000393900 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 TPSD1-202ENST00000397534 896 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 NUS1P3-201ENST00000423502 862 ntBASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AC073130.2-202ENST00000444244 842 ntTSL 3 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 MRNIP-220ENST00000523084 1096 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AC006064.3-201ENST00000537921 477 ntTSL 4 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 LINC02298-201ENST00000546968 965 ntTSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AC005520.2-201ENST00000556194 573 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 IFT20-206ENST00000578122 834 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 IFT20-208ENST00000578985 831 ntTSL 3 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AC005253.2-201ENST00000593791 432 ntTSL 3 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 METTL26-214ENST00000614890 801 ntTSL 3 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 PDLIM3-213ENST00000629667 1016 ntTSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 TMEM132E-203ENST00000631683 4379 ntAPPRIS P2 TSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 SLC26A1-202ENST00000398516 3109 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 ARHGAP9-201ENST00000393791 2597 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 ZNF208-205ENST00000601773 2027 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 HNF4A-202ENST00000316673 1470 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AC010642.2-201ENST00000634676 2413 ntTSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 STARD8-201ENST00000252336 4862 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 LIMS1-202ENST00000338045 1876 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 MUTYH-206ENST00000372115 1888 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 PPP1CB-203ENST00000395366 4893 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AP002414.2-201ENST00000591780 3365 ntBASIC13.33□□□□□ -0.28
CDH20Q9HBT6 SEMA5B-201ENST00000195173 4523 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 ODF3-201ENST00000325113 1307 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 IL25-201ENST00000329715 1315 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 SRD5A3-201ENST00000264228 4190 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 HOGA1-202ENST00000370646 2488 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 NRBP1-201ENST00000233557 2887 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 RNFT2-203ENST00000392549 2896 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 IL9R-201ENST00000244174 1944 ntAPPRIS P3 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AL109954.1-202ENST00000564051 2148 ntBASIC13.33□□□□□ -0.28
CDH20Q9HBT6 ORMDL3-204ENST00000579695 2106 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 GGT6-201ENST00000301395 2534 ntTSL 2 BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 AEN-201ENST00000332810 3117 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CDH20Q9HBT6 TRIM50-202ENST00000453152 1599 ntAPPRIS P1 TSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 PLA1A-201ENST00000273371 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 AC091100.1-201ENST00000558424 2354 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 FYN-205ENST00000368682 3234 ntAPPRIS ALT1 TSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 LINC00937-207ENST00000544461 3033 ntTSL 2 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 ASCL1-201ENST00000266744 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 KIF7-201ENST00000394412 4551 ntAPPRIS P1 TSL 5 BASIC13.32□□□□□ -0.28
CDH20Q9HBT6 TOM1L1-201ENST00000348161 1895 ntTSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms