Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 ABCB7-202ENST00000339447 2234 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 TTC29-208ENST00000513335 2226 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 CYB5R3-205ENST00000407623 2153 ntTSL 3 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 ADAM33-206ENST00000617732 1971 ntTSL 5 BASIC14.53□□□□□ -0.08
BRF2Q9HAW0 FYTTD1-201ENST00000241502 6866 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 FGD1-201ENST00000375135 4275 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 ZNF324-201ENST00000196482 3000 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 AC023908.3-201ENST00000564211 3047 ntBASIC14.52□□□□□ -0.08
BRF2Q9HAW0 CAMSAP3-202ENST00000446248 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 MED16-203ENST00000325464 2922 ntAPPRIS P2 TSL 5 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 MRPL11-201ENST00000310999 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 DCAF17-202ENST00000375255 5828 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 TAP2-201ENST00000374897 5684 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 IMPDH1-203ENST00000354269 2580 ntTSL 2 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 ENDOU-203ENST00000545824 1513 ntTSL 2 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 POMK-203ENST00000614426 1527 ntAPPRIS P1 TSL 4 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 COPS7B-224ENST00000620578 2500 ntTSL 2 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 EML1-201ENST00000262233 4535 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 HNRNPA1P48-201ENST00000562726 1377 ntBASIC14.52□□□□□ -0.08
BRF2Q9HAW0 CAMLG-201ENST00000297156 2221 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 AC005089.1-201ENST00000619486 2241 ntBASIC14.52□□□□□ -0.08
BRF2Q9HAW0 GRAPL-201ENST00000344415 1308 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 ZDHHC11B-204ENST00000622126 1301 ntTSL 5 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
BRF2Q9HAW0 RPS15-201ENST00000233609 534 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 CGB5-201ENST00000301408 841 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 TNFRSF12A-202ENST00000341627 881 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 AL121601.1-201ENST00000426367 326 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 TIMM8B-201ENST00000504148 819 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 SERBP1P5-201ENST00000510079 1181 ntBASIC14.52□□□□□ -0.09
BRF2Q9HAW0 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 CCKBR-204ENST00000531712 463 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 AC091544.3-201ENST00000556424 531 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 IFT20-206ENST00000578122 834 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 IFT20-208ENST00000578985 831 ntTSL 3 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 SPDYE22P-201ENST00000582158 798 ntBASIC14.52□□□□□ -0.09
BRF2Q9HAW0 AC124287.1-201ENST00000582249 838 ntTSL 3 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 TUBB6-203ENST00000586653 788 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 RPS15-205ENST00000586686 562 ntTSL 5 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 ELOF1-206ENST00000590700 585 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 RPS15-208ENST00000591804 711 ntTSL 5 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 RPS15-209ENST00000592588 510 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 KXD1-204ENST00000595073 1095 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 FOLR3-204ENST00000611028 820 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 ENAH-203ENST00000366843 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 PTPN20-206ENST00000395722 1995 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 ABHD16A-202ENST00000440843 1906 ntTSL 2 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 E2F6-202ENST00000381525 3218 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 TPM1-206ENST00000358278 1717 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 OPA1-203ENST00000361715 6384 ntTSL 5 BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 NUMBL-201ENST00000252891 3561 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 RHD-206ENST00000423810 1637 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
BRF2Q9HAW0 SLC35C2-204ENST00000372230 2246 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 MAP3K10-201ENST00000253055 3436 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 FAM122A-201ENST00000394264 4575 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 MAGI1-201ENST00000330909 7415 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 SLC41A1-201ENST00000367137 4997 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 MAGED4B-207ENST00000485287 2618 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC068418.2-201ENST00000577309 3703 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 PTBP1-203ENST00000356948 3598 ntAPPRIS ALT1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 TDG-209ENST00000544861 1387 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 GPC3-202ENST00000394299 2379 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 WASH2P-202ENST00000538033 2800 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 PPFIBP1-216ENST00000545334 2805 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CMA1-201ENST00000206446 633 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 C1orf43-205ENST00000368519 1163 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 KRTAP10-2-201ENST00000391621 1149 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 MIOX-203ENST00000395733 1021 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CRYAA-203ENST00000398133 600 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 UBE2F-202ENST00000409332 1138 ntTSL 5 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 RAB34-206ENST00000415040 1293 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC139149.1-202ENST00000442532 783 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CXorf40A-211ENST00000450602 1204 ntAPPRIS P3 TSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 LINC01336-202ENST00000506086 479 ntTSL 5 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC022616.1-201ENST00000518688 554 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC008750.2-202ENST00000532688 729 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC125603.3-201ENST00000550742 486 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AL356805.1-201ENST00000556383 341 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AL359711.2-201ENST00000563105 872 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 INO80C-206ENST00000586489 594 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AL132655.2-201ENST00000596276 594 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC133539.2-201ENST00000604757 467 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 FP236240.1-202ENST00000624019 601 ntTSL 3 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 AC008761.3-201ENST00000624803 892 ntBASIC14.51□□□□□ -0.09
BRF2Q9HAW0 KRT32-201ENST00000225899 1750 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 CSDC2-201ENST00000306149 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 PODNL1-204ENST00000538517 2744 ntTSL 2 BASIC14.51□□□□□ -0.09
BRF2Q9HAW0 EML4-201ENST00000318522 5549 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms